LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele16g1479	ATGGAAACCCTATTGATCGAAACCCTCCCTCTTGCTCCATTTGACTGCATTCTTTCTACCTCCCCCTCTCTCTACTCCCCATCACCTCCTCCACGCATCACCTTATCCCATCCTCCCGCTATTCCATCATCGTCCTCCTTAGTAGAGGGTAGGAGAAGAAGACCAGAAACAGAGCTTCTCAAGGAACCGTACTTTGGGCTCAGAATTCCGTATCTGCTCTGCACCAAGAAAATGGTTTTCTGTTCGAAAGCAAGCTCCGGCATTCTACTTTTATTCTTACTGACTTGCTTTCCCTTCCCTTCTACAGAAGCTTATGATCCACTAGACCCAAACGGAAATATCACAATCAAATGGGATGTCATCAACTGGACCCCTGATGGCTATGTTGTACGTTCTTTGTCTTACTTTATCATCCACATTAATAGCGGCAGCGAAAGCCTTGTTGAGACAAGACAGCATCAAACACCTTACAATAAGCAAATTCCACATTGCTGCAAAGGTGGTGTACTCAGCTCATTGGTACAGGATCCAACCCATGCGGTTGCTTCATTTCAGGTAACTGTTGGCAATGCCGGAACCAATAACAGAACAGTCAAGGTGCCCAAAAACTTCACCCTGAGTGCACCAGGACCAGGTTATACTTGTGGCCCCGCAAAAATTGTGAAACCCACTCGATTCATAACACCAGACAAAAGGAGAGTAACACAAGCACTCATGACATGGAATGTAACATGTACGTATTCACAATTTGTAGCTCAGAAAAATCCTGCTTGCTGCGTCTCCCTCTCTGCTTTCTCTAATGATACTATTGTGCCCTGCCCAACATGTTCATGTGGCTGTCAGGGCAACTCATCTAGCTGTGAAGAGTCAGATTCTGCTCGTTTGAAACCTATGGTTCAATGTACTAGTCATATGTGCCCCATCCAAGTCCACTGGCATGTTAAGGCTAACGAAAAGGAGTTCTGGCGAGTTCAGATCAATATTACTAATTTTAATTATAGGATGGGTTTTCCTGATTGGAACTTGATTGTTCAACACCCAAACGTTGGCAATCTGACCCACCTTTTCGGTTTTATCCACAGGGGATTAGCACCAGACGCAGCTCTAAATGATACAGTAATTCTATGGGGAATGAAGTTGTACAATGATGTTGTTAACCGAGCAAGACCTTTTGGTAATGTGCAGACAGAGCTACTTTTTGGAAAGGAAGAATCAAACTTTAGTTTGGAGAAGGGATGGGCATTTCCTCAGAGAATCTATTTCAATGGTGACAGATGTATGATGCCACCACCAGATGCATACCCATTGACTTTGTTGGCCAATGCCAGTTCCCGGCAACGACTGAAAGAAACTCCACATCTTAGCACTGCATCCAAGCTTGAAAGTACCGCTAATCTATCAACTCGGTGTTATTCTTTCCGCACACACCCTCTTTCTTCTTTGCTGGGTCTGTTCTTCTATCTGTCAAAAGTGTCGTGTGTCTCTTATACTCTGTACAGCAGATTTCCATATGCAATCCTTATCATTTTCACAATCAAAATGGTTTATGTTTCAGAAGCTTATGATCCACTTGACCCAAATGGAAATATCACAATCAAATGGGATGTCATCAGCTGGACCCCTGATGGTTATGTTGCTGTAGCTAGCATGCAAAATTTCCAAAAGTTTCGTCACATTTCAGCACCAGGGTGGTTTTTGGGATGGACATGGGCAAACAAGGAGGTGATATGGAGCATGATGGGAGCACAGGCCACTGAACAAGGGGATTGTTCTAAATTCAAAAGAAGCATCCCCCATAGTTGTAAAAAGGACCCAACAATTGTTGATTTACTTCCAGGAACTCCTTACAATCAGCAAGTTGAAAATTGCTGCAAAGGCGGGGTACTCAGTTCAAGGGCACAGGATCCAACCAATGCGGTTGCTTCATTTCAGGTAACTGTTGGCAATGCTGGAAACACTAAAAAAACAGTCAAGTTGCCCAGAAACTTCACACTGAATGCACCAGGACCAGGTTATACGTGTGGCCCCGCAAAAATTGTGAAACCCACTCTATTCATAACACCAGGCAAAAGGAGAGTAACACAAGCACTCATGACATGGAATGTGGTATGCACTTATTCACAATTTCTAGCTCAGAAAACACCTACTTGCTGTGTCTCCCTCTCTTCTTTCCATAATGATACTATTGTACCTTGCCCAACGTGTTCATGCGGTTGCCGGGGCAGCTCATCTAGCTGTGCAAAGTCAGGTTCAGCGCATTTGAAACCTTTGGTTCAATGTAGTAGTCATATGTGCCCCGTCCAAGTTCACTGGCATGTTAAGGCTAACTACAAGGATTACTGGCGAGTTAAGATCACTGTTACCAATTTTAATTACAGGATGAATTATTCTGACTGGAACTTGGTTGTTCAAGATCCCAACTTTGACAATCTGGCCCAGCATTTCGGTTTCAACTACAAGAGATTAACATTGAACGGAGCAATAAATGATACAGCAATGCTCTGGGGGATTAAGTTGTACAATGATGTTCTGAACCAAGCTGGCGTTTCTGGTAATGTACAAGGAGAGCTACTTTTTCGAAAGGAGAAATCAAGCTTCGGTTTCAACAAGAAGGGCTGGGGTTTTCCTCGGAGGATGTATTTCAATGGTGACAATTGTGTGATGCCACCACCAGATGCATACCCTTTGTTGCCCAATGCCATTTCTCCAATTGAGAATTAA	2721	0.4366	METLLIETLPLAPFDCILSTSPSLYSPSPPPRITLSHPPAIPSSSSLVEGRRRRPETELLKEPYFGLRIPYLLCTKKMVFCSKASSGILLLFLLTCFPFPSTEAYDPLDPNGNITIKWDVINWTPDGYVVRSLSYFIIHINSGSESLVETRQHQTPYNKQIPHCCKGGVLSSLVQDPTHAVASFQVTVGNAGTNNRTVKVPKNFTLSAPGPGYTCGPAKIVKPTRFITPDKRRVTQALMTWNVTCTYSQFVAQKNPACCVSLSAFSNDTIVPCPTCSCGCQGNSSSCEESDSARLKPMVQCTSHMCPIQVHWHVKANEKEFWRVQINITNFNYRMGFPDWNLIVQHPNVGNLTHLFGFIHRGLAPDAALNDTVILWGMKLYNDVVNRARPFGNVQTELLFGKEESNFSLEKGWAFPQRIYFNGDRCMMPPPDAYPLTLLANASSRQRLKETPHLSTASKLESTANLSTRCYSFRTHPLSSLLGLFFYLSKVSCVSYTLYSRFPYAILIIFTIKMVYVSEAYDPLDPNGNITIKWDVISWTPDGYVAVASMQNFQKFRHISAPGWFLGWTWANKEVIWSMMGAQATEQGDCSKFKRSIPHSCKKDPTIVDLLPGTPYNQQVENCCKGGVLSSRAQDPTNAVASFQVTVGNAGNTKKTVKLPRNFTLNAPGPGYTCGPAKIVKPTLFITPGKRRVTQALMTWNVVCTYSQFLAQKTPTCCVSLSSFHNDTIVPCPTCSCGCRGSSSSCAKSGSAHLKPLVQCSSHMCPVQVHWHVKANYKDYWRVKITVTNFNYRMNYSDWNLVVQDPNFDNLAQHFGFNYKRLTLNGAINDTAMLWGIKLYNDVLNQAGVSGNVQGELLFRKEKSSFGFNKKGWGFPRRMYFNGDNCVMPPPDAYPLLPNAISPIEN	906

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele16g1479	906	PANTHER	PROTEIN COBRA	508	901	IPR006918	GO:0010215\|GO:0016020
	Lele16g1479	906	Pfam	COBRA-like protein	152	248	IPR006918	GO:0010215\|GO:0016020
	Lele16g1479	906	Pfam	COBRA-like protein	544	707	IPR006918	GO:0010215\|GO:0016020

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele16g1479	Lele-ChrLele16	8465954	8472444	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele16g1479	493	902	COBRA Gene Family	AT3G02210	66.824	0.0	606