Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1469 ATGATTAAGATTCCAAAAGAGCCATCAGATGTTCCAAGAAAACAGGAAGATTCATCAAGTAATTATGAGAAAGCAAAGGCATCATCGGCATCGGCATCGGCATCATCATCATGGAGCAGCAGGGAACAGCAATGGGTGAGGTTGAAGGATCCGAGGATAGTGAGGGTTGCAAGATCCTGTGGAGGCAAAGACAGGCACAGCAAGGTTTGCACCATACGAGGTTTGAGAGACAGAAGAGTGAGGTTGTCGGTTCCTACAGCCATTCAATTGTATGATCTTCAAGAGAGGCTAGGGTTCAATCAACCCAGTAAGGTTATTGATTGGCTTCTTAATGCTGCCAAGAATGACATAGATGAGCTTCCTCCTCTTCCACCATTAGATCTGGCCCTCCTTCATCATCATGCTATCCTCACCTCTAATAATAGTTCTCAGCCTAACAACAAAGAAGAAGCTGCAGCTGGGTGGGAAGCTTCCAATAATAACACTACCTTCTGGAAATTGATAGAGCCCAAAGAAGCTTCCTCGTCTCATGATGATGATGTTAAACAAGGAAGCAACAACGATAACGATCAGTTATCTCATCATGCTGTACAAGTTGTTCCACATCATCATCATCATCATCCCTCCTTTGTTGGGTATGACCAGTGGGAAGGTTCTGGATCAGGTGGTCATCGTGTTTCTCATCAGACAGATTTGCAAAGCATTAACGTTGTACCTTTCTCATCAACTTTGTCTTTGTGCACTGGGGATTCTTCTCATCATCATCATTTTGCTTCACATTTTGGAGCGAATATTGACATGGATCATAATAATAATATTCCAAGACAAGTCAACTATAATAACCACTATCCCATGATGCTGCAGAGTTCTAGCTCAAATCTGTACCCTATCTCCTCTATGGCACAATCCTTGAATAAACCCTTTGGGTTGAGCATGATGACTCCTAAAAACACTTCAGATCAGAGCCATCATCAGTCACATAACCACCACCTTCATCATTTTCCCCCCAAGTGA 1014 0.429 MIKIPKEPSDVPRKQEDSSSNYEKAKASSASASASSSWSSREQQWVRLKDPRIVRVARSCGGKDRHSKVCTIRGLRDRRVRLSVPTAIQLYDLQERLGFNQPSKVIDWLLNAAKNDIDELPPLPPLDLALLHHHAILTSNNSSQPNNKEEAAAGWEASNNNTTFWKLIEPKEASSSHDDDVKQGSNNDNDQLSHHAVQVVPHHHHHHPSFVGYDQWEGSGSGGHRVSHQTDLQSINVVPFSSTLSLCTGDSSHHHHFASHFGANIDMDHNNNIPRQVNYNNHYPMMLQSSSSNLYPISSMAQSLNKPFGLSMMTPKNTSDQSHHQSHNHHLHHFPPK 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1469 337 MobiDBLite consensus disorder prediction 22 37 - -
Lele16g1469 337 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 20 329 IPR005333 GO:0003700
Lele16g1469 337 MobiDBLite consensus disorder prediction 310 337 - -
Lele16g1469 337 MobiDBLite consensus disorder prediction 1 37 - -
Lele16g1469 337 MobiDBLite consensus disorder prediction 1 21 - -
Lele16g1469 337 ProSiteProfiles TCP domain profile. 62 120 IPR017887 -
Lele16g1469 337 MobiDBLite consensus disorder prediction 199 226 - -
Lele16g1469 337 Pfam TCP family transcription factor 62 177 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1469 Lele-ChrLele16 8398713 8399726 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1469 45 247 TCP Transcription Factor Family AT3G02150 44.231 2.64e-48 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lele16g1469 TCP 1.2e-28 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g1026 13 21316327 21317325 Lele16g1469 16 8398713 8399726 hybridization
Lele14g0927 14 19721026 19722027 Lele16g1469 16 8398713 8399726 hybridization