Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1465 ATGTTTCCTCCTTCTGGTAGTTCACTGATCAAAAGGCGTTTCTTTCTCAAGCCCCTGTGCCCCTTGCTCCTTCTGGAATTCTGCTTTCTCTTATGGGTCCTCTTCACTTCTTTTAGTGACGCCCTTCCCGTCGATTCGGACAAATCAGTGCTTCTTCATTTCAAGAATTCGGTCTCTGATCCATCGGGGCTGCTTTCGAGCTGGAATTCGGCCGGATATTCCAATCACTGTTCTTGGTTCGGTGTTCTCTGCGACTCGAATTCGCGGGTTGTCGCTCTCAATATTACTGGAAATGGTGGTCGAAGTAATCGAAGCTCTTCTCCTTGTTCTGATTCTGCTGAATTTCCACTTTATGGGTTCGGTATTAGGAGGAGCTGTGACGGCAGTAGAGGAGCATTGTTCGGGAAGGTTTCGCCTCTGATCAGTAAGCTTACTGAGCTCAGGATTCTGTCACTTCCGTTTAATGGTTTCGAGGATGAAATTCCTCCTGAAATTTGGGGTATGGGCAAGTTGGATGTTATTGACCTAGAGGGCAACTCCATAACTGGGTCACTTCCGTCTTATTTTGACGGCTTGAGGAACTTGCGAGTTATTAACCTCGGGTTTAATAAAATTGTCGGGGAGATACCGGACTCACTTGCCCATCTTGAAAGTTTGGAAATTTTGAATTTAGCTGCGAATGGCTTGAATGGATCTGTTCCTGGGTTCATCGGTAAGTTGAAGGGGGTGTATCTACTGTCTAATCTGCTTACTGGGCCTGTACCACTTGAGATAGGGGATAACTGTGGGAAGCTCGAACATCTGGATTTGTCAGGTAACTTCTTAGTTCAGCGAATTCCAAGCAGTTTGGGAAATTGTAGTCGATTACGGACACTTTTGTTGTATTCAAATTTGTTGGAAGAGGGAATTCCTTCCGAACTTGGTAATCTTAAGCTGCTTGAAGTATTGGATGTTTCGAGAAATGCTCTCAGTGGTCCAGTACCTCCCGAAATTGGGAATTGTTCAACCCTGTCTGTCCTTGTGCTATCGAATCTTTTCAATCCACTTCCTGAAGTCAACAATACTGTGAGGGAATCTTCTCAATTGGTTTCCATAAATTATGAATTGAATTATTTTGAAGGTGCCATGCCTGTGGAAATTACATCCCTCCCAAAGCTGAGAATATTATGGGCGCCAAGGGCAACTCTGGAAGGTAGTTTCCCAAGCAGTTGGGGTGCTTGCGATAACTTAGAGATGGTCAATTTGGCTCAGAATTATTTCACTGGGGAGTTTCCTAATCAGCTTAGTGGCTGCAAGAAGCTGCATTTTCTTGATTTAAGCTCAAACAACCTTACTGGAGAGCTTGCTGAAGAACTCCATGTTCCTTGTATGACTGTGTTTGATGTTAGTGGGAATATCTTGTCTGGTTCAATTCCTGATTTTTTTAACGGTACTTGTCCTTCAGTTCCTTCCTGGAATGGCATTCTGTTTGAACCTGACAATGCCCCAATTCCATATATGTCCTTTTTTTCATCAAAGGTTCATGATGGATCCCTTTTGACTTCAGTGGGAGAAGTTGGTCTTTCGGTTATTCACAATTTTGGGAACAACAATTTTACTGGCATGCAGTCATTGCCCATAGCGCATGACAGATTGGGGAAGAAAATGGGTTATGCGTTTCTTGTTGGAGAAAACAAGCTTACTGGGCCGTTACCTACCAACGTATTTGACAAGTGTGATGGATTAGATGCCTTGCTCTTAAATGTCAGTTATAATAGGTTATCTGGCCAGATTCCTGCGGAGTTTGGTAGAATGTGCAGGTCATTAAAATTTTTGGATGTGTCCGGGAATCGGGTGACTGGAACAATTCCTGTTGGTTTAGGGGAATTGGTGTCTCTTGTTTCTCTGAACCTTAGTCGGAATCAGTTACAAGGTTCGATTCCTGTCAGCCTTGGCCAGATGAAAAATCTGGTGTTTCTTTCCTTGGCATCTAATAACTTGTCCGGCTCCATTCCAACCAACCTGGGGCAGTTGTACTCTTTAGAAGTTTTGGATCTTTCATCTAATTCTCTCACAGGTGAGATTCCAAAGGGTTTTGAGAACTTGAGAAATCTGACCCGTCTTTTTCTCAACAACAACAGACTTTCTGGACATATTCCTACTGGTCTGGCAAATGTGACTGCACTCTCAGCATTTAATGTGTCCTTCAATAACTTGTCTGGACCATTTCCATCAAATAATAACTTGTTGAAATGCAGCAGTGCTGTTGGGAATCCATTATTACGTCCTTGCCATATGCTTTCTTTGACTGCGCCATCGACAGATCAACAAGGGCAGGTAGCTGAATCAAATTCTTATACTGCTGCAGCAGCACCAGAAACTTCCAGCAAAGGTAGTGGGTCTGGCTTCAATTCTATTGAAATCGCATCTATAACGTCTGCATCAGCCATCGTTTCTGTTCTTTTAGCCCTAATTATTCTGTTCTTTTATACCCGTAAGTGGAACTCCAGGTCCAGGGTTGTTGGTTCCACAAGAAAAGATGTTATTGTTTTCACCGATATTGGGGTTCCATTGACTTTTGAAACTGTTGTTCGTGCCACTGGTAATTTCAATGCAAGCAATTGTATTGGGAATGGAGGATTTGGAGCGACCTATAAGGCAGAGATAGCACCAGGAAATCTAGTGGCTATAAAACGTCTGTCAGTAGGACGATTCCAAGGTGTTCAACAATTTGATGCAGAGATTAAGACCCTTGGAAGACTTCGCCATCCAAATCTTGTCACTTTGTTTGGTTACCATGCAAGTGAGACAGAGATGTTTCTGATATACAATTATCTGCCGGGTGGGAACCTGGAAAAGTTTATCCAGGAGAGGTCAACAAGGGCTGTGGATTGGAGAATTCTTCACAAGATTGCATTGGACATTGCCCGGGCGCTTGCATATCTCCATGATCAGTGCGTACCACGTGTCCTCCATCGAGACGTGAAGCCCAGCAACATACTGTTGGATGATGATTTCAATGCGTATTTGTCTGACTTTGGATTGGCTAGACTTCTGGGAACTTCTGAAACCCATGCTACCACAGGGGTGGCAGGAACATTCGGCTATGTCGCACCCGAGTATGCCATGACTTGTCGGGTTTCTGACAAGGCCGACGTGTACAGTTATGGTGTTGTACTTCTAGAGTTGCTCTCAGACAAGAAGGCATTAGATCCTTCATTTTCTTCCTATGGGAATGGCTTCAACATAGTAGCGTGGGCATGCCTGCTACTTCGGCAAGGGAGAGCAAAGGAGTTCTTCACAGCAGGGTTATGGGATGCAGGACCCTCAGATGATTTGGTAGAGGTGTTGCACTTGGCCATTATGTGTACCGTTGATTCGCTCTCGACGAGACCGTCGATGAAACAGGTTGTACGAAGGCTAAAGCAACTTCAACCGCCATCATGCTAG 3429 0.4421 MFPPSGSSLIKRRFFLKPLCPLLLLEFCFLLWVLFTSFSDALPVDSDKSVLLHFKNSVSDPSGLLSSWNSAGYSNHCSWFGVLCDSNSRVVALNITGNGGRSNRSSSPCSDSAEFPLYGFGIRRSCDGSRGALFGKVSPLISKLTELRILSLPFNGFEDEIPPEIWGMGKLDVIDLEGNSITGSLPSYFDGLRNLRVINLGFNKIVGEIPDSLAHLESLEILNLAANGLNGSVPGFIGKLKGVYLLSNLLTGPVPLEIGDNCGKLEHLDLSGNFLVQRIPSSLGNCSRLRTLLLYSNLLEEGIPSELGNLKLLEVLDVSRNALSGPVPPEIGNCSTLSVLVLSNLFNPLPEVNNTVRESSQLVSINYELNYFEGAMPVEITSLPKLRILWAPRATLEGSFPSSWGACDNLEMVNLAQNYFTGEFPNQLSGCKKLHFLDLSSNNLTGELAEELHVPCMTVFDVSGNILSGSIPDFFNGTCPSVPSWNGILFEPDNAPIPYMSFFSSKVHDGSLLTSVGEVGLSVIHNFGNNNFTGMQSLPIAHDRLGKKMGYAFLVGENKLTGPLPTNVFDKCDGLDALLLNVSYNRLSGQIPAEFGRMCRSLKFLDVSGNRVTGTIPVGLGELVSLVSLNLSRNQLQGSIPVSLGQMKNLVFLSLASNNLSGSIPTNLGQLYSLEVLDLSSNSLTGEIPKGFENLRNLTRLFLNNNRLSGHIPTGLANVTALSAFNVSFNNLSGPFPSNNNLLKCSSAVGNPLLRPCHMLSLTAPSTDQQGQVAESNSYTAAAAPETSSKGSGSGFNSIEIASITSASAIVSVLLALIILFFYTRKWNSRSRVVGSTRKDVIVFTDIGVPLTFETVVRATGNFNASNCIGNGGFGATYKAEIAPGNLVAIKRLSVGRFQGVQQFDAEIKTLGRLRHPNLVTLFGYHASETEMFLIYNYLPGGNLEKFIQERSTRAVDWRILHKIALDIARALAYLHDQCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGTSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWACLLLRQGRAKEFFTAGLWDAGPSDDLVEVLHLAIMCTVDSLSTRPSMKQVVRRLKQLQPPSC 1142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1465 1142 Gene3D Ribonuclease Inhibitor 348 530 IPR032675 -
Lele16g1465 1142 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 306 1136 - -
Lele16g1465 1142 Pfam Leucine rich repeat 170 229 IPR001611 GO:0005515
Lele16g1465 1142 Pfam Leucine rich repeat 649 708 IPR001611 GO:0005515
Lele16g1465 1142 PRINTS Leucine-rich repeat signature 434 447 - -
Lele16g1465 1142 PRINTS Leucine-rich repeat signature 671 684 - -
Lele16g1465 1142 Gene3D Ribonuclease Inhibitor 44 240 IPR032675 -
Lele16g1465 1142 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 827 938 - -
Lele16g1465 1142 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 255 348 - -
Lele16g1465 1142 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 361 538 - -
Lele16g1465 1142 ProSitePatterns Serine/Threonine protein kinases active-site signature. 983 995 IPR008271 GO:0004672|GO:0006468
Lele16g1465 1142 Pfam Leucine rich repeat N-terminal domain 45 85 IPR013210 -
Lele16g1465 1142 MobiDBLite consensus disorder prediction 773 794 - -
Lele16g1465 1142 ProSiteProfiles Protein kinase domain profile. 863 1137 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele16g1465 1142 ProSitePatterns Protein kinases ATP-binding region signature. 869 891 IPR017441 GO:0005524
Lele16g1465 1142 FunFam Leucine-rich repeat receptor protein kinase EMS1 665 749 - -
Lele16g1465 1142 Gene3D Ribonuclease Inhibitor 241 347 IPR032675 -
Lele16g1465 1142 Gene3D Transferase(Phosphotransferase) domain 1 939 1139 - -
Lele16g1465 1142 Gene3D Phosphorylase Kinase; domain 1 825 938 - -
Lele16g1465 1142 SMART LRR_typ_2 671 694 IPR003591 -
Lele16g1465 1142 SMART LRR_typ_2 216 238 IPR003591 -
Lele16g1465 1142 SMART LRR_typ_2 623 647 IPR003591 -
Lele16g1465 1142 SMART LRR_typ_2 192 215 IPR003591 -
Lele16g1465 1142 SMART LRR_typ_2 310 334 IPR003591 -
Lele16g1465 1142 SMART LRR_typ_2 695 718 IPR003591 -
Lele16g1465 1142 SMART LRR_typ_2 144 168 IPR003591 -
Lele16g1465 1142 SMART LRR_typ_2 262 286 IPR003591 -
Lele16g1465 1142 Pfam Leucine Rich Repeat 264 286 IPR001611 GO:0005515
Lele16g1465 1142 SUPERFAMILY L domain-like 557 760 - -
Lele16g1465 1142 Pfam Protein kinase domain 866 1064 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele16g1465 1142 SUPERFAMILY Protein kinase-like (PK-like) 845 1134 IPR011009 -
Lele16g1465 1142 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 939 1141 - -
Lele16g1465 1142 SUPERFAMILY RNI-like 136 483 - -
Lele16g1465 1142 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 574 664 - -
Lele16g1465 1142 CDD STKc_IRAK 869 1137 - -
Lele16g1465 1142 SMART serkin_6 863 1141 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele16g1465 1142 Gene3D Ribonuclease Inhibitor 531 767 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1465 Lele-ChrLele16 8362744 8366172 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1465 23 1142 Receptor kinase-like Gene Family AT3G02130 65.611 0.0 1406
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XV Lele16g1465 Pkinase 3.3e-43 CL0016