Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1462 ATGGAGAAAAAACAAATCTTTCTTCATTTGGTGCTCGTCTGGTTCATGTTTATGCTCAGAGAAAGCACTGGCATGGAAGCAGAAGGAGTAAGAGGAGAAGAAGAAGCTGATAGGATCGTGGAACTTCCTGGGCAACCAAAAGTATCGTTCCAACAATTCTCAGGCTACGTCACTGTAAATCGCGTTGCTGGTAGAGCTCTCTTTTACTGGCTCACTGAATCCCCTCAAAACCCCTTCTCCAAACCTCTCGTCATTTGGCTCAACGGAGGTCCGGGTTGTTCATCCGTGGCTTATGGAGCATCCGAGGAGATCGGCCCATTCCGAATCAATAAAACCGCTTCGGGGCTTTACCTTAACAAGTTCGCCTGGAACACCGTCGCCAACCTCCTCTTCTTGGAAGCTCCTGCCGGCGTCGGCTTCTCCTACTCCAACCGCTCCTCCGATCTCTACGACACTGGCGACCGCCGCACCGCGAAGGACTCTCTGGAATTCATAATCAGGTGGCTAGAACGATTCCCGCGGTACAAGAATCGGGAACTTTATATCAGTGGAGAGAGCTACGCAGGTCATTATGTGCCTCAATTAGCCAGAGAAATCATCACGTATAATGCAAAGGCCAAGTACCCAATCAATATCAAAGGGATTTTGGTTGGGAATGCAGTGACGGACAATTACTATGATAACTTGGGGACGGTAACGTACTGGTGGAGCCACGCTATGATCTCCGATCAGACTTACCGGCAGCTCATGAGCACCTGCGATTTCCACCGGAAAAAGGAATCCGATGAGTGCGAGTCTTTGTATAGCTACGCCATGGACCAAGAATTCGGTAATATTGATCAGTACAACATCTATGCTCCTCCGTGCAACAACTCTGACGGCAGCTCCGCCACCACCCGCCGCTCCATGCACCTGCCCCACCGCCCCCATCATCCGATATTTAGGCAAATGTCTGGGTATGATCCCTGTACAGAGAAGTATGCTGAGATATACTACAATAGGCCAGATGTTCAGAAAGCACTCCATGCCAACACAACCGCCATTCCTTACAAGTGGACTGCGTGCAGTGAGGTTCTGAATCGAAACTGGAACGATACAGATGTGTCCATACTTCCCATTTATAGGGAGTTGATAGCACATGGAACCAGAGTCTGGGTTTTCAGTGGGGATGTTGATTCGGTGGTGCCAGTTACAGCAACCAGATATTCCCTTGCACAGCTCAAGTTGGCGACCAAGATTCCTTGGTATCCTTGGTACGTCAAGAAACAGGTTGGAGGGTGGACAGAGGTATATGAAGGGCTAACGTTTGCGACAGTGAGAGGGGCGGGTCATGAAGTGCCACTGTTCAAGCCTAGAGAAGCTCTCCAGTTATTCAAATCATTCATTGCAGCAAAACCTCTTCCCAAGTCCTAA 1413 0.494 MEKKQIFLHLVLVWFMFMLRESTGMEAEGVRGEEEADRIVELPGQPKVSFQQFSGYVTVNRVAGRALFYWLTESPQNPFSKPLVIWLNGGPGCSSVAYGASEEIGPFRINKTASGLYLNKFAWNTVANLLFLEAPAGVGFSYSNRSSDLYDTGDRRTAKDSLEFIIRWLERFPRYKNRELYISGESYAGHYVPQLAREIITYNAKAKYPINIKGILVGNAVTDNYYDNLGTVTYWWSHAMISDQTYRQLMSTCDFHRKKESDECESLYSYAMDQEFGNIDQYNIYAPPCNNSDGSSATTRRSMHLPHRPHHPIFRQMSGYDPCTEKYAEIYYNRPDVQKALHANTTAIPYKWTACSEVLNRNWNDTDVSILPIYRELIAHGTRVWVFSGDVDSVVPVTATRYSLAQLKLATKIPWYPWYVKKQVGGWTEVYEGLTFATVRGAGHEVPLFKPREALQLFKSFIAAKPLPKS 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1462 470 ProSitePatterns Serine carboxypeptidases, histidine active site. 434 451 IPR033124 GO:0004185
Lele16g1462 470 FunFam Carboxypeptidase 370 464 - -
Lele16g1462 470 FunFam Carboxypeptidase 33 291 - -
Lele16g1462 470 ProSitePatterns Serine carboxypeptidases, serine active site. 182 189 IPR018202 GO:0004185
Lele16g1462 470 SUPERFAMILY alpha/beta-Hydrolases 41 467 IPR029058 -
Lele16g1462 470 FunFam Carboxypeptidase 319 467 - -
Lele16g1462 470 Gene3D - 323 360 - -
Lele16g1462 470 Gene3D - 370 463 - -
Lele16g1462 470 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 40 451 IPR001563 GO:0004185|GO:0006508
Lele16g1462 470 Pfam Serine carboxypeptidase 44 463 IPR001563 GO:0004185|GO:0006508
Lele16g1462 470 Gene3D alpha/beta hydrolase 33 291 IPR029058 -
Lele16g1462 470 PRINTS Carboxypeptidase C serine protease (S10) family signature 132 142 IPR001563 GO:0004185|GO:0006508
Lele16g1462 470 PRINTS Carboxypeptidase C serine protease (S10) family signature 168 193 IPR001563 GO:0004185|GO:0006508
Lele16g1462 470 PRINTS Carboxypeptidase C serine protease (S10) family signature 119 131 IPR001563 GO:0004185|GO:0006508
Lele16g1462 470 PRINTS Carboxypeptidase C serine protease (S10) family signature 434 447 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1462 Lele-ChrLele16 8343501 8347225 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1462 328 467 Calmodulin-binding Proteins AT2G22960 31.206 6.41e-16 74.3