Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele16g1459 | ATGTCCTCTGGAAAGAATCTAACGGTTCAGATTGGATGTGCCAAAGCCCCAAGCCCTGGTCCGCGGGTGATTAGTGGCAAGGGTTTTTCGCCCTTCAGAGTTCAGGCTCTTCGAAGTGAAAATCGCAGAACTATCGCGAAGCAGAGAGAACGACAGAGATCTGCACTCGCTCCTACAAGGCTACAAGTGGCCTCTCTACATATAACGATTGGAAAGCTTCTCAAGCATTCTGCTGTGAAATGCATCAGCCCAGAATTTTCTGCTTCCACTCCATCAATTTACCAGGCAATTAGGTCCATGTCATCTGCAAAGCTTTTTATTGGAGGTGTTTCATATAACACAGATGATATGGGTCTAAGAGAAGCCTTCTCTCGCTATGGAGAGATAATTGATGCAAGGGTAATTATGGATCGTGAGACAGGAAGGTCCAGAGGATTTGCGTTCGTAACTTTTGCATCAAGTGAGGAGGCATCTGCTGCTATGCAGGCTATGGATGGTCAGGATCTTAATGGTAGGAGGATACGGGTTAACCATGCTACAGAGAGGTCGCGACCAGGCTTTGGTGCTGGCAATTATGGTGGAGGCGGCTATGGTGGAAGTAACTATGGAGGTGATAATAACTATAGGAATCCAAGTTATGGAAGCAGTGGTGTTGGTTTTGGGGGCAGTGGAAATTATGGTGTTCCTGATGGTGCTGGGGGCAGTAATTACCAATTCAATCAAAACTCTGGTGGAGATCTTGGCTTTGAACCAAGTGGCAATTCAAGTATGGGAGATGATGGTGGCCAATTCGGTTGCAACCAAAATGAAGGAACTGGCTTAGACGATGAAGATCATTTGAGAGAGAACAACGATGAAGACAACTTGAGAGAGAGCCGGTAG | 882 | 0.4637 | MSSGKNLTVQIGCAKAPSPGPRVISGKGFSPFRVQALRSENRRTIAKQRERQRSALAPTRLQVASLHITIGKLLKHSAVKCISPEFSASTPSIYQAIRSMSSAKLFIGGVSYNTDDMGLREAFSRYGEIIDARVIMDRETGRSRGFAFVTFASSEEASAAMQAMDGQDLNGRRIRVNHATERSRPGFGAGNYGGGGYGGSNYGGDNNYRNPSYGSSGVGFGGSGNYGVPDGAGGSNYQFNQNSGGDLGFEPSGNSSMGDDGGQFGCNQNEGTGLDDEDHLRENNDEDNLRESR | 293 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele16g1459 | 293 | SUPERFAMILY | RNA-binding domain, RBD | 88 | 210 | IPR035979 | GO:0003676 | |
Lele16g1459 | 293 | MobiDBLite | consensus disorder prediction | 232 | 293 | - | - | |
Lele16g1459 | 293 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 103 | 181 | IPR000504 | GO:0003723 | |
Lele16g1459 | 293 | PANTHER | HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED | 42 | 260 | - | - | |
Lele16g1459 | 293 | FunFam | Glycine-rich RNA-binding protein 3, mitochondrial | 75 | 205 | - | - | |
Lele16g1459 | 293 | SMART | rrm1_1 | 104 | 177 | IPR000504 | GO:0003723 | |
Lele16g1459 | 293 | Gene3D | - | 95 | 245 | IPR012677 | - | |
Lele16g1459 | 293 | MobiDBLite | consensus disorder prediction | 272 | 293 | - | - | |
Lele16g1459 | 293 | MobiDBLite | consensus disorder prediction | 234 | 270 | - | - | |
Lele16g1459 | 293 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 105 | 175 | IPR000504 | GO:0003723 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele16g1459 | Lele-ChrLele16 | 8334100 | 8336718 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele16g1459 | 61 | 182 | Eukaryotic Initiation Factors Gene Family | AT3G16380 | 32.520 | 7.60e-11 | 60.5 |