Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1442 ATGCCTGCTCTCTTCTCTCTCCCTAGGTGCTTGGGAAGTTATTCTCGGAGTAGTAGCGGCGGCGGCGACAGTGGCATCGACCTCGTCGCCGATAACGCCAATTCGTCTGTCGAGTGCTATGCCTGCACTCAGGTGGGCGTTCCTGTCTTCCACTCCACCAGCTGCGACAGCTATCACCCGCCGCAATGGGAGGCTTCTGCGGGTTCTTCCTTAGTCCCTATCCAGCAGAACAATACTGCGGCGAAGAATCCGAGGCAACGACCCAAATCGGGGCCGTTCGGGCGAGTGTTGGATCCGAGGAGCAAGCGCGTGCAGAGGTGGAACAGGGCGCTGCTGCTGGCGCGAGGGCTGGCGCTGGCGGTGGACCCATTGTTCTTCTACGCGCTGTCAATAGGGAGGGACGGGACGCCGTGCCTGTATATGGACGGCGGTTTAGCGGTGATAGTGACGGTGGTGAGGACGTTGGTGGACGTGGTTCACGTGTGCCACGTATGGCTGCAGTTCAGGCTGGCGTACGTGTCGAAGGAGTCGATGGTGGTTGGCTGTGGGAAGCTGGTGTGGGACGCGCGTGCCATCGCAGCGCATTACCTGAGGTCCTTCAGAGGCTTCTGGTTCGACGCCTTTGTGATACTTCCCGTTCCCCAGGCAGTGTTTTGGCTGGTACTCCCAAAGTTGATAAGAGAAGAGCAAATTAAAATCATAATGACTATAATGCTATTGATCTTCTTGTTTCAATTCCTGCCCAAGGTTTACCACAGCATCTGCATGATGAGGAGGATGCAAAAAGTCACGGGCTATATCTTCGGCACCATTTGGTGGGGCTTTGGCCTCAACCTCATAGCTTACCTTATTGCTTCTCACGTAGCAGGAGGGTGCTGGTATGTGCTTGCAATTCAACGTGTTGCGTCGTGCCTGAGGCAGCAGTGTGAAAGAGGGTATGGATGCGATCTCCCTCTGTCATGTTCAGATGAAGTGTGTTACAAGTTTCTGTCACCCACAGGCACAGAAGGAACTTCATGTAATGGAAACACCACAGTAGTGGTAAGAAAGCCGTTGTGCTTAGATGTGCAAGGACCTTTTAAATATGGGATCTACCAATGGGCTCTCCCAGTCATTTCCAGCAACTCTTTGGCTGTCAAGATTCTTTATCCCATATTTTGGGGTTTGATGACCCTCAGCACTTTTGGCAATGATCTTGAGCCCACTAGTAACTGGCTAGAAGTGATTTTCAGCATATGCATCGTACTCAGCGGACTAATGCTCTTCACTCTGTTGATTGGTAACATCCAGGTATTCTTACACGCAGTAATGGCGAAGAAAAGAAAGATGCAGCTGAGATGTCGTGACATGGAATGGTGGATGAGGAGGAGGCAGCTTCCGTCCCCTTTAAGACAGAGAGTTCGCCATTTTGAACGCCAGAGATTTGCAGCCATGGGAGGAGAGGACGAAATGGAATTGATCAGAGACTTTCCTGAAGGATTGAGGAGAGACATCAAGCGTTATCTTTGCTTAGACCTCATAAAAAAGGTACCTCTGTTTCACAACTTGGATGATCTTATCGTTGACAACATCTGTGATAGGGTGAAACCCCTAGTCTTTTCTAAAGATGAAAAGATAATCAGGGAAGGGGACCCAGTGCCAAGAATGGTATTCATAGTTCGCGGGCGCATAAAACGCATGCAAAGCCTAAGCAAAGGCATGGTGGCCACAAGCGTCATCGAAGCCGGGGGCTTTTTGGGGGACGAGCTTCTCTCCTGGTGCCTTCGCCGGCCGTTCCTCGACCGACTTCCAGCATCGTCCGCCACGTTCATATGCCAGGAATCAGCAGAAGCCTTTGGGTTGGAGGCAGATCACCTCAAGTACGTGACGGACCACTTCAGGTACAAGTTTGCCAACGAGAGGCTGAAGAGAACGGCGAGATATTACTCATCGAATTGGAGAACGTGGGCTGCCGTGAACATACAATTTGCATGGCGGCGATACAGGCAGAGGACGAGAGGTCCGGTGAACCCTGTGACCGAAGGTGGAGGAAGAATTAGTGCTGAACGCAGGCTCTTGCAGTATGCTGCCATGTTCATGTCAATAAGGCCACATGACCACCTCGAATGA 2109 0.5173 MPALFSLPRCLGSYSRSSSGGGDSGIDLVADNANSSVECYACTQVGVPVFHSTSCDSYHPPQWEASAGSSLVPIQQNNTAAKNPRQRPKSGPFGRVLDPRSKRVQRWNRALLLARGLALAVDPLFFYALSIGRDGTPCLYMDGGLAVIVTVVRTLVDVVHVCHVWLQFRLAYVSKESMVVGCGKLVWDARAIAAHYLRSFRGFWFDAFVILPVPQAVFWLVLPKLIREEQIKIIMTIMLLIFLFQFLPKVYHSICMMRRMQKVTGYIFGTIWWGFGLNLIAYLIASHVAGGCWYVLAIQRVASCLRQQCERGYGCDLPLSCSDEVCYKFLSPTGTEGTSCNGNTTVVVRKPLCLDVQGPFKYGIYQWALPVISSNSLAVKILYPIFWGLMTLSTFGNDLEPTSNWLEVIFSICIVLSGLMLFTLLIGNIQVFLHAVMAKKRKMQLRCRDMEWWMRRRQLPSPLRQRVRHFERQRFAAMGGEDEMELIRDFPEGLRRDIKRYLCLDLIKKVPLFHNLDDLIVDNICDRVKPLVFSKDEKIIREGDPVPRMVFIVRGRIKRMQSLSKGMVATSVIEAGGFLGDELLSWCLRRPFLDRLPASSATFICQESAEAFGLEADHLKYVTDHFRYKFANERLKRTARYYSSNWRTWAAVNIQFAWRRYRQRTRGPVNPVTEGGGRISAERRLLQYAAMFMSIRPHDHLE 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1442 702 Pfam Ion transport protein 107 430 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Lele16g1442 702 Gene3D Jelly Rolls 510 628 IPR014710 -
Lele16g1442 702 ProSiteProfiles cAMP/cGMP binding motif profile. 512 591 IPR000595 -
Lele16g1442 702 CDD CAP_ED 512 619 IPR000595 -
Lele16g1442 702 Gene3D Helix hairpin bin 438 503 - -
Lele16g1442 702 Gene3D - 138 435 - -
Lele16g1442 702 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 86 665 - -
Lele16g1442 702 SUPERFAMILY Voltage-gated potassium channels 98 433 - -
Lele16g1442 702 SUPERFAMILY cAMP-binding domain-like 439 626 IPR018490 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1442 Lele-ChrLele16 8211045 8214414 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1442 35 702 Ion Channels AT5G15410 78.024 0.0 1043