Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1439 ATGGAAAACTACTGGAGATTGAGAGTGATGATCACGGTGGTGGCGTTGGCAGTGATGTTGCCGATAATGGCGGTGACGGGAGATCCGGTGCTGCACAAGGTGGGTGGATCCAAAGGTTGGATCAATCACGACGTTAATTATACTGAATGGTCTTCTCACGAGCAATTCTTTCTCGGCGATTGGCTCTTATTCAGCTTTGACAAGCGATACTTCAACGTTCTGGAGGTGAATGAGACAAGCTACGAGAATTGCAGAGACAATGGGTTTGTGAAGAATTTGACGCATGGTGGAAGAGATGTGGTGCAATTGACAGAGGCCAGGACATACTACTACCTCACCAGCGGAGGTTATTGCTTTCAAGGTATGAAAGTCGCCGTCACCGTCCAACATGGCCACCGTGAAGCAGCTCCGGCTTCGTCTCCCTCTCACTCTTCTGCATCTTCTTCTTTCTCTGTGTTCAATGCACTTCATTTCCTCACGCCTTTCATGGTGACCTGGCCACATGTCTAG 510 0.4902 MENYWRLRVMITVVALAVMLPIMAVTGDPVLHKVGGSKGWINHDVNYTEWSSHEQFFLGDWLLFSFDKRYFNVLEVNETSYENCRDNGFVKNLTHGGRDVVQLTEARTYYYLTSGGYCFQGMKVAVTVQHGHREAAPASSPSHSSASSSFSVFNALHFLTPFMVTWPHV 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1439 169 ProSiteProfiles Phytocyanin domain profile. 30 130 IPR003245 GO:0009055
Lele16g1439 169 Pfam Plastocyanin-like domain 42 122 IPR003245 GO:0009055
Lele16g1439 169 FunFam Lamin-like protein 28 131 - -
Lele16g1439 169 Gene3D - 30 134 IPR008972 -
Lele16g1439 169 SUPERFAMILY Cupredoxins 31 129 IPR008972 -
Lele16g1439 169 PANTHER BLUE COPPER PROTEIN 31 139 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1439 Lele-ChrLele16 8200873 8202711 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1439 13 149 Phytocyanin Superfamily AT2G27035 41.606 6.12e-40 131
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g1057 13 21518223 21519885 Lele16g1439 16 8200873 8202711 hybridization