Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1438 ATGGCTTCTCCGCTTGCTCTCACTGCGAGGCCTGGCTTCTTTCCGGAAAATTCGACCGACAATTCCTCCAAAGAAGCGGATGGCGCCCAGAAGAATTCGGGTTTCAAGCAGAGTAGACCCATGAATCTGATTATTGCTCGTTCACCAATGTTTACAGTTCCACCTGGCTTAAGCCCTTCTGGGTTGCTTAATTCACCGGGCTTCTTTCCTCCTCAGAGCCCCTTTGGAATGTCCCATCAGCAGGCTTTGGCCCAGGTTCAAGCTCAAGCTGTCCTGGCGCAATCTCATATGCACATGCTAGGTGATTATCAACAATCTGCTGTAACAGCTCCTGGTGAACCATTGGCAATTGTTCCAAGTGAAGCTTCAGACCAGCAAGTGGCACCACCTGCATCAGATTCTAGAAGTGCTCAAATGGAGACTTCAGATATTTCTCACACTGATAAGAAATATCAACTTTCTTCCTTAGCCATTGATAAACCTGCAGATGATGGCTACAATTGGCGTAAGTATGGGCAGAAGCAGGTTAAAGGGAGTGAGTACCCACGGAGCTACTACAAGTGTACACATCTGAATTGCCCAGTAAAGAAAAAGGTCGAGCGTGCCCCTGATGGTCACATAACTGAAATTATCTATAAAGGCCAGCATAATCATGAACTGCCTCAGTCAAACAAGCGTATCAAAGATAATTCTGATTTAAATGGAAATACAAGTCTTCAAGTTCAGTCTGACTCGACTACACAAGGCTGGGTGGGAAATTTAAGCAAGTTTGGTGAAAGCATGCCTGATCATTCAGTGCCAGAAAGTGATCCCTCATCCAATCAAGGTGCTCACCGGCAACCACCTGTATCAAGTGAGAGTGAGGAAGTGGGTGATGCTGATATGAGGGAAGAGGAGGGAGATGTTAGTGAGCCAAACCCCGAGAGAAGGAACACTGATCTTGTGGCTTCTGAAGTACCTATGTCTCACAAGACTGTCACAGGACCCAAAATCATTGTGCAAACAAGAAGCGAAGTTGATCTTCTGGATGATGGCTACAGGTGGCGCAAGTATGGGCAAAAAGTGGTAAAGGGAAATCCCTATCCAAGGAGTTATTACAAATGCACCAGTGCAGGATGCAATGTGCGTAAGCACGTTGAGAGGGCTTCAACAGACCCCAAAGCTGTCATAACTACCTATGAGGGAAAACATAACCATGATGTTCCTGCTGCTAAAACCAGCAGCCACAACACAGCTAATAGCAATTCAATGCCAGTAAAACCACAGAGAGTGGTGCCTGAAAAGCATCATTTGCTTAGAGATATGGATTTTGGAAATAACAACCAAAGACCGGTCGCATTACGCTTGAAAGAAGAGCAAATCATAGTATAG 1371 0.4566 MASPLALTARPGFFPENSTDNSSKEADGAQKNSGFKQSRPMNLIIARSPMFTVPPGLSPSGLLNSPGFFPPQSPFGMSHQQALAQVQAQAVLAQSHMHMLGDYQQSAVTAPGEPLAIVPSEASDQQVAPPASDSRSAQMETSDISHTDKKYQLSSLAIDKPADDGYNWRKYGQKQVKGSEYPRSYYKCTHLNCPVKKKVERAPDGHITEIIYKGQHNHELPQSNKRIKDNSDLNGNTSLQVQSDSTTQGWVGNLSKFGESMPDHSVPESDPSSNQGAHRQPPVSSESEEVGDADMREEEGDVSEPNPERRNTDLVASEVPMSHKTVTGPKIIVQTRSEVDLLDDGYRWRKYGQKVVKGNPYPRSYYKCTSAGCNVRKHVERASTDPKAVITTYEGKHNHDVPAAKTSSHNTANSNSMPVKPQRVVPEKHHLLRDMDFGNNNQRPVALRLKEEQIIV 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1438 456 FunFam WRKY transcription factor 33 329 395 - -
Lele16g1438 456 SMART WRKY_cls 162 220 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele16g1438 456 SMART WRKY_cls 342 401 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele16g1438 456 MobiDBLite consensus disorder prediction 14 39 - -
Lele16g1438 456 MobiDBLite consensus disorder prediction 399 421 - -
Lele16g1438 456 SUPERFAMILY WRKY DNA-binding domain 334 402 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele16g1438 456 FunFam WRKY transcription factor 149 222 - -
Lele16g1438 456 SUPERFAMILY WRKY DNA-binding domain 160 221 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele16g1438 456 Gene3D WRKY domain 148 222 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele16g1438 456 Gene3D WRKY domain 327 403 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele16g1438 456 MobiDBLite consensus disorder prediction 122 150 - -
Lele16g1438 456 MobiDBLite consensus disorder prediction 213 317 - -
Lele16g1438 456 MobiDBLite consensus disorder prediction 1 39 - -
Lele16g1438 456 MobiDBLite consensus disorder prediction 266 282 - -
Lele16g1438 456 MobiDBLite consensus disorder prediction 125 141 - -
Lele16g1438 456 ProSiteProfiles WRKY domain profile. 157 221 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele16g1438 456 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 65 417 IPR044810 GO:0003700
Lele16g1438 456 MobiDBLite consensus disorder prediction 404 420 - -
Lele16g1438 456 Pfam WRKY DNA -binding domain 163 219 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele16g1438 456 Pfam WRKY DNA -binding domain 343 399 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele16g1438 456 MobiDBLite consensus disorder prediction 227 254 - -
Lele16g1438 456 ProSiteProfiles WRKY domain profile. 337 402 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1438 Lele-ChrLele16 8191702 8194805 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1438 35 454 WRKY Transcription Factor Family AT2G03340 54.233 5.77e-136 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele16g1438 WRKY 1e-25 CL0274