Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1431 ATGATTATGATGCAGGATACTCTGTACTTACACTATGGCAAACAGTACTTGAAAGATTGTTATATTGAAGGAAGCGTGGACTTTATTTTTGGCAGTAGCACTGCTCTTTTGGAACATTGCCATATTCACTGCAAGTCTGAAGGTTTCATAACTGCACAGAGCAGAAAATCTTCTCATGAAACAACTGGTTATGTATTCCTAAGGAACAAGAATCAGTTACCTTCACAAGATGAGGCTGATCTCTTCAGATATCTAAGGCATCAGTTTGGCCTTTGTTGGCTGTTGCCACACAGCAGATGTGTCATAACGGGTAATGGAGATACTTCCTACGTATATCTTGGACGACCATGGGGACCTTTTGGAAGAGTGATCTTTGCACACACTTATATGGATCGATGTATAAGGCCTCATGGCTGGAATAATTGGGATAAAGTCGAGAATGAGAGAACTTGTTGCTTTTATGAATACAGGTGGGTATCTCATATCTAGTGTTATGGACATGTTTGCTGTCCATCCAAACGAGTAGCATGGGCGAGAGAATTGATAGATGAAGAAGCAGAACAGTTCCTTTCCCATCGTTTCATTGACCCAGATGCTAATAGACCTTGGCTTGCCCAAAGAATGGCTTTGAGTATTCCATATTCTGCTTAG 651 0.4101 MIMMQDTLYLHYGKQYLKDCYIEGSVDFIFGSSTALLEHCHIHCKSEGFITAQSRKSSHETTGYVFLRNKNQLPSQDEADLFRYLRHQFGLCWLLPHSRCVITGNGDTSYVYLGRPWGPFGRVIFAHTYMDRCIRPHGWNNWDKVENERTCCFYEYRWVSHIXCYGHVCCPSKRVAWARELIDEEAEQFLSHRFIDPDANRPWLAQRMALSIPYSA 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1431 216 Gene3D - 1 88 IPR012334 -
Lele16g1431 216 SUPERFAMILY Pectin lyase-like 4 203 IPR011050 -
Lele16g1431 216 Pfam Pectinesterase 107 196 IPR000070 GO:0030599|GO:0042545
Lele16g1431 216 Pfam Pectinesterase 4 93 IPR000070 GO:0030599|GO:0042545
Lele16g1431 216 ProSitePatterns Pectinesterase signature 2. 22 31 IPR033131 -
Lele16g1431 216 Gene3D - 93 212 IPR012334 -
Lele16g1431 216 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 3 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1431 Lele-ChrLele16 8159438 8161279 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1431 5 209 Carbohydrate Esterase AT5G47500 30.918 9.01e-28 106