Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1412 ATGGAAGCGAAGCTGAGAGACGAGGTGAGCCTGAGCATTCCCTTGCTCAATGGCGAAGCCACACCAAACAAAGCTGCTTCTGACGACCAAGCCACCGACGACGGCTCCACCTCCTTCCTCAAGACTGGCCTTAATTGCCTTAATGCCTTATCAGGAGTTGGGATACTCTCCGTTCCATACGCTCTTGCATCTGGAGGATGGCTAAGCTTAATTCTTCTATTTATCATTGGCACGGCAACATTTTACACTGGTGTATTGATTAAGAAATGCATGGATATGAATCTGGGAATCAAAACCTATCCCGACATAGGTTATCGTGCATTTGGAAAGAAAGGAAAGTTTGCTGTGTCAATAACAATGTACACTGAACTCTACTTAGTTGCAACAGGATTCTTAATTCTAGAAGGGGATAACTTAAACAACATATTCCCCAATACCGTCATTGAATTGTCCGGCTTAACAGTTGGTGGAAAGCAATTATTTGTGATACTGATAGGCCTTGTCATTATGCCTTCAGTTTGGTTGGATAACTTAAATCTTCTTTCTTATATATCAGCAAGTGGTGTGTTTGCTTCTGTTATCATAATTTGCTCCATCTTTTGGACTGCAAAAGTAGACGGAGTTGGATTTCACCATAGAGGGACCCTTATTAATTGGGATGGCATCCCTACTGCTGTTAGCTTGTATGCCTTCTGTTATTGTGCACATCCAGTTTTCCCCACCTTGTATAATTCCATCAGAAAGAAACCTCAATTTTCCAACGTCTTATTAATGTGTTTTGTGCTGAGCACTCTTGGTTATGCTTCCATGGCTGTATTTGGTTACTTGATGCTTGGCTCAGACGTACAATCACAGATAACGTTAGATCTACCAATAAACAAGTTAAGTTCAAAAGTTGCAATATTTACTACTCTGGTGAATCCAATAGCCAAGTATGCTTTGATGGTGACACCAATTAAAAATGCTCTGAAAGAGTTGCTGCCTGGAAATTACAAGAATAGGCTCGCAAATATCTTGATAAGCACGGCCTTGGTAATCAGTACTATGATAGTTGCCCTGACAATTCCTTTCTTTGGGTACCTTATGTCTTTAGTAGGAGCAGTTCTGAGTGTGACAGCTTCAATTCTACTTCCATGCTTGTGCTACTTAAAGATTTCAGGGACATACAAGAAATTTTGCTTTGAAACTGTAGTAATAGTGGGAATAATATTCACAGGTGCAGTGATAGGAATATTTGGTACATACACTTCAGTCCTAAAAATTATCGAGAATTGGTAG 1278 0.4022 MEAKLRDEVSLSIPLLNGEATPNKAASDDQATDDGSTSFLKTGLNCLNALSGVGILSVPYALASGGWLSLILLFIIGTATFYTGVLIKKCMDMNLGIKTYPDIGYRAFGKKGKFAVSITMYTELYLVATGFLILEGDNLNNIFPNTVIELSGLTVGGKQLFVILIGLVIMPSVWLDNLNLLSYISASGVFASVIIICSIFWTAKVDGVGFHHRGTLINWDGIPTAVSLYAFCYCAHPVFPTLYNSIRKKPQFSNVLLMCFVLSTLGYASMAVFGYLMLGSDVQSQITLDLPINKLSSKVAIFTTLVNPIAKYALMVTPIKNALKELLPGNYKNRLANILISTALVISTMIVALTIPFFGYLMSLVGAVLSVTASILLPCLCYLKISGTYKKFCFETVVIVGIIFTGAVIGIFGTYTSVLKIIENW 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1412 425 Pfam Transmembrane amino acid transporter protein 36 418 IPR013057 -
Lele16g1412 425 PANTHER OS05G0424000 PROTEIN-RELATED 43 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1412 Lele-ChrLele16 8055399 8057535 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1412 27 422 Amino Acid or Auxin Permease AAAP Family AT3G28960 59.698 3.25e-168 476