Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1410 ATGATAAAACCAGGTATTGGCGGAGACGATAGGGACATATCTGTTGGTGTTTGTGATAAGTGGGACGCTGCATTGAGTGCTTCCGACGAGAAGAAAGTAGCAGGGATAGGAGCTGAACTTGCAGCAGGGTTCATTGTGATGGTGATGGTTTATGCCATCGGACACATCTCAGGGGCCCACATAAACCCAGCAGTCTCCATAGCTTTCGCAGCTTTGGGACATTTTCCATGGAAGAGGCCCCATTTTACGTCGGAGGAGATTGGAACAAACTTTCCTTCTGGAACAGATGCTCAAGCTTTAGTCATGGAGATCGTCATCACTTTCATTCTCATGTTCGTTATCTGCGCCGTCACAACTGATTCAAAAGCTGTGAGACTGATATCGGGGGGATCGTTGAATCCAGCAAGAACATTGGGTCCTGCATTTGCAAGGGCATGGTCTTACAGTACTGTCCAGGAGAATGATGATGATAACTCAGCTTCCTCCATTAAACTAACTTCGTGTCTATCCAAGCTACGCTCCATGAATAAGGAAGCTGATCAAGTTGGTGCGGAAGACGATCCACGAGTCCTGCATGCGAACAGAGTTTAA 591 0.4704 MIKPGIGGDDRDISVGVCDKWDAALSASDEKKVAGIGAELAAGFIVMVMVYAIGHISGAHINPAVSIAFAALGHFPWKRPHFTSEEIGTNFPSGTDAQALVMEIVITFILMFVICAVTTDSKAVRLISGGSLNPARTLGPAFARAWSYSTVQENDDDNSASSIKLTSCLSKLRSMNKEADQVGAEDDPRVLHANRV 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1410 196 ProSitePatterns MIP family signature. 60 68 IPR022357 -
Lele16g1410 196 Gene3D Glycerol uptake facilitator protein. 82 160 IPR023271 -
Lele16g1410 196 Pfam Major intrinsic protein 33 79 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele16g1410 196 Gene3D Glycerol uptake facilitator protein. 13 81 IPR023271 -
Lele16g1410 196 SUPERFAMILY Aquaporin-like 26 144 IPR023271 -
Lele16g1410 196 PANTHER AQUAPORIN NIP2-1 24 79 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1410 Lele-ChrLele16 8044022 8045030 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1410 36 148 Major Intrinsic Protein MIP AT4G10380 37.342 1.78e-25 98.6