Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1402 ATGTTAGTTCCGGGTGTGGGCTCCCCTTGCAGCATTGCCATCACAACAGCATTAAGCCATAATTACCGTGCATTAGAATCACTAGCTAGAGCTCTAGTTTTAAATAATGTTCTATCTAGGGTTTTCAAATTCGAACACAAGGTCAAATAGGTTAGGGCTCGATGTGCATATACACTAGAAAGCAGGGCTGGAACAGAGGGAAGTGGCCAGATGAGGAAACGCCAGGTTGTGGTGAGAAGAGAGGAGCCTGCTAGGTGCTCAAGCTCTTCGTCTTTTACTGTTAGGAGTGTGAAATATGGAGAGTGCCAAAAGAATCACGCTGCTAACGTCGGAGGATATGCCGTGGACGGTTGCCGCGAGTTCATGGCGAGTGGTGATGAAGGCACAACCGCCGCTCTGACCTGTGCCGCCTGTGGTTGCCACAGGAACTTTCACAAAAGAGAGGTGGAGACTGAAGTAGTGTGTGATGAGTGCTCTTCACCTACCTCCAACGGTACTTGA 501 0.491 MLVPGVGSPCSIAITTALSHNYRALESLARALVLNNVLSRVFKFEHKVKXVRARCAYTLESRAGTEGSGQMRKRQVVVRREEPARCSSSSSFTVRSVKYGECQKNHAANVGGYAVDGCREFMASGDEGTTAALTCAACGCHRNFHKREVETEVVCDECSSPTSNGT 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1402 166 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 72 152 - -
Lele16g1402 166 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 99 148 IPR006456 -
Lele16g1402 166 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 98 149 IPR006456 -
Lele16g1402 166 Pfam ZF-HD protein dimerisation region 97 149 IPR006456 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1402 Lele-ChrLele16 8002675 8003410 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1402 71 165 Zinc finger-homeobox gene family AT3G28917 74.000 3.94e-42 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Lele16g1402 ZF-HD_dimer 8.2e-30 No_clan