Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1399 ATGTCTTTTGGAAGACGAAGACTGAGGAGGAGCTTCGAATCAGACAGGAAGATGGTGCAGCGGCTCACGTACAGGAAGCGTCACAGCTACGCCACCAAATCCAACCAGCATAGGGTTGTGAAAACCCCTGGTGGGAAGTTGGTTTATCAAACCACAAAGAAGAGAGCAAGCGGTCCTAAGTGTCCTGTTACTGGAAAGAGGATCCAAGGGATTCCACATTTGAGACCTGCTGAATACAAGCGGTCCAGATTGCCAAGGAACCGTCGAACTGTTAACAGGGCCTATGGTGGTGTGTTGTCTGGAGGAGCTGTAAGAGAAAGGATAATCCGAGCTTTTCTCGTTGAGGAGCAAAAGATTGTGAAGAAGGTATTGAAGATCCAAAAGGCAAAAGAAAAGCAAGCATCAAGGAGTTAA 414 0.4734 MSFGRRRLRRSFESDRKMVQRLTYRKRHSYATKSNQHRVVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPAEYKRSRLPRNRRTVNRAYGGVLSGGAVRERIIRAFLVEEQKIVKKVLKIQKAKEKQASRS 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1399 137 PRINTS Ribosomal protein L34 signature 61 71 IPR008195 GO:0003735|GO:0005840|GO:0006412
Lele16g1399 137 PRINTS Ribosomal protein L34 signature 30 43 IPR008195 GO:0003735|GO:0005840|GO:0006412
Lele16g1399 137 PRINTS Ribosomal protein L34 signature 43 60 IPR008195 GO:0003735|GO:0005840|GO:0006412
Lele16g1399 137 PRINTS Ribosomal protein L34 signature 83 105 IPR008195 GO:0003735|GO:0005840|GO:0006412
Lele16g1399 137 PANTHER 60S RIBOSOMAL PROTEIN L34 18 133 IPR008195 GO:0003735|GO:0005840|GO:0006412
Lele16g1399 137 ProSitePatterns Ribosomal protein L34e signature. 32 45 IPR018065 -
Lele16g1399 137 Gene3D - 56 137 - -
Lele16g1399 137 Pfam Ribosomal protein L34e 18 113 IPR008195 GO:0003735|GO:0005840|GO:0006412
Lele16g1399 137 Gene3D - 18 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1399 Lele-ChrLele16 7979792 7982239 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1399 18 134 Cytoplasmic Ribosomal Protein Gene Family AT1G69620 92.308 2.81e-75 218