Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1395 ATGGCCGAAGCTACAGAGCCTAAAGCATTGCCGGAGGCTGAGAAGAAGAAGGAGCAGAGTTTGCCATTTTACCAGCTATTATCTTTTGCAGATAAGTATGACTGGCTCCTCATGATCTCTGGGAGCTTGGGAGCAGTTGTTCATGGCTCATCTATGCCTGTTTTCTTCCTTCTTTTTGGTGAGATGGTCAATGGGTTTGGCAAAAACCAGATGGATTTGAAGAAAATGACTGTAGAAGTATCAAAGTATGCTCTTTATTTTGTGTACCTTGGCCTCGTCGTTTGCATATCATCCTATGCAGTGAGCACGCTGAGAAAGAAGTACTTGGAGGCGGTACTTAAACAGGACGTTGGGTTCTTTGACACAGATGCAAGAACAGGGGATATCGTTTTTAGTGTATGCACTGACACTCTGCTCGTTCAAGATGCTATTAGCGAGAAGGTGGGGAACTTCATACATTATCTGTCAACGTTCCTGGCGGGTCTGGTGGTTGGTTTTGTGTCAGCATGGAGGTTAGCTCTTCTAAGTGTTGCAGTGATTCCGGGAATTGCTTTTGCTGGTGGCTTGTATGCTTACACCCTCACAGGCCTCACCTCCAAGAGCCGCGAATCCTATGCGAATGCCGGAATAATCGCCGAGCAGGCAATTGCTCAAGTTCGAACTGTATACTCGTATGTTGGTGAGAGCAAGGCCTTGAATTCTTATTCTGATTTGATACAGAACACACTGAAGCTCGGATACAAGGCCGGAATGGCAAAAGGTTTAGGCTTGGGATGTACATATGGGATAGCTTGCATGTCATGGGCCTTAGTGTTTTGGTATGCCGGAGTTTTCATCAGGAATGGCCAAACTGATGGAGGAAAGGCATTCACTGCTATTTTCTCCGCCATTGTTGGTGGCATGAGTTTGGGACAGTCATTTTCAAATTTAGGGGCATTTAGTAAAGGCAAAGCAGCGGGATACAAATTGATGGAAATCATTAAGCAGAAACCCACCATAGAAGGCCCATCTGAGGGGAAATGCTTAGACTTCTCCAACCCGTCAACTCGCCGGACACGTTCATCACGACTAAGCCATTCGCTTTCAACCAAGTCTTTAAGCCTCCGGTCCGGAAGCTTGAGGAACCTCAGTTACCAATACAGCACAGGGGCGGATGGTCGCATTGAGATGATATCAAATGCTGAAACGGACAAGAAGAATCCTGCTCCTGATGGATACGTCTTCCGTTTACTCAAGTTAAATGCCCCCGAATGGCCTTACTCAATAATGGGCGCTGTAGGATCTGTTCTCTCTGGTTTTATTGGCCCGACCTTTGCCATTGTTATGAGCAATATGATCGAGGTGTTTTACTATAGAAATTATGCATCCATGGAGAGGAAGACTAAGGAGTACGTCTTCATATACATTGGAGCCGGTCTTTATGCCGTTGGGGCATATTTGATACAGCATTACTTCTTCAGTATTATGGGTGAAAATCTCACTACAAGGGTTCGAAGAATGATGCTTGCCGCAATTTTAAGGAATGAAGTAGGATGGTTCGATGAAGAGGAACACAATTCAAACCTAGTAGCAGCTCGGCTGGCAACTGATGCTGCAGATGTGAAGTCTGCTATTGCTGAGAGGATCTCAGTGATTCTGCAGAACATGACATCTCTTCTCACTTCTTTCATAGTTGCTTTCATCGTGGAATGGAGAGTTTCCTTGCTCATCCTGGGAACCTTCCCTCTTCTTGTTCTAGCTAACTTTGCTCAGGGAAGCCATGAGGAACTTGTGAGCAGACCAGAGGGTGCATATTCGAGACTCTTGCAGCTACAAAGCCATCATATGAGTCAGGACTCAGGACTGCCTTTTTCGCTTTTTTCTTTGCATGTGTACTCTGAGCATTTTCAGACAAAAGAGGTAGCTCATAAGGATAGCTACTTGAAAGCTCCACGAGGGCTTGGCCCCTCCGGGTTTGCATTTCCAATACAATTGATACCAAGACATAGCAAAGATTTAATAATTAAAGGGGGTAATTTATGGAGACTTCATGAGCTAGCTAAGACTTTTTGTATGCGAACAGAAGCAAAAAGGTTCTCAAGTAAAATAAATGTCCAACAAACAGAGAGATTAAAGACGGTGGATGCATATGAATCCAAAGGGCATGGTGGTTCAACTGCTGTACACGAAGTTGCAGTACGCGTGGGAGGTATACAAGCTAGATTCTTAGAGGGTACATTCATATACAGTAACTTAAGACAGCTTTTTATGAGGGTAGCAGTGACATTTGAGTCTACCATTTCTGACCATTTAGTCTCGGGAAGGCTGAAGAAACTTTAA 2319 0.4459 MAEATEPKALPEAEKKKEQSLPFYQLLSFADKYDWLLMISGSLGAVVHGSSMPVFFLLFGEMVNGFGKNQMDLKKMTVEVSKYALYFVYLGLVVCISSYAVSTLRKKYLEAVLKQDVGFFDTDARTGDIVFSVCTDTLLVQDAISEKVGNFIHYLSTFLAGLVVGFVSAWRLALLSVAVIPGIAFAGGLYAYTLTGLTSKSRESYANAGIIAEQAIAQVRTVYSYVGESKALNSYSDLIQNTLKLGYKAGMAKGLGLGCTYGIACMSWALVFWYAGVFIRNGQTDGGKAFTAIFSAIVGGMSLGQSFSNLGAFSKGKAAGYKLMEIIKQKPTIEGPSEGKCLDFSNPSTRRTRSSRLSHSLSTKSLSLRSGSLRNLSYQYSTGADGRIEMISNAETDKKNPAPDGYVFRLLKLNAPEWPYSIMGAVGSVLSGFIGPTFAIVMSNMIEVFYYRNYASMERKTKEYVFIYIGAGLYAVGAYLIQHYFFSIMGENLTTRVRRMMLAAILRNEVGWFDEEEHNSNLVAARLATDAADVKSAIAERISVILQNMTSLLTSFIVAFIVEWRVSLLILGTFPLLVLANFAQGSHEELVSRPEGAYSRLLQLQSHHMSQDSGLPFSLFSLHVYSEHFQTKEVAHKDSYLKAPRGLGPSGFAFPIQLIPRHSKDLIIKGGNLWRLHELAKTFCMRTEAKRFSSKINVQQTERLKTVDAYESKGHGGSTAVHEVAVRVGGIQARFLEGTFIYSNLRQLFMRVAVTFESTISDHLVSGRLKKL 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1395 772 CDD ABC_6TM_Pgp_ABCB1_D1_like 38 323 - -
Lele16g1395 772 Pfam ABC transporter transmembrane region 422 585 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele16g1395 772 Pfam ABC transporter transmembrane region 43 300 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele16g1395 772 FunFam ABC transporter B family member 1 25 348 - -
Lele16g1395 772 MobiDBLite consensus disorder prediction 338 360 - -
Lele16g1395 772 PANTHER ABC TRANSPORTER B FAMILY 395 583 - -
Lele16g1395 772 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 422 585 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele16g1395 772 SUPERFAMILY ABC transporter transmembrane region 403 584 IPR036640 GO:0005524|GO:0016020
Lele16g1395 772 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 41 315 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele16g1395 772 MobiDBLite consensus disorder prediction 342 360 - -
Lele16g1395 772 Gene3D ABC transporter type 1, transmembrane domain 16 350 IPR036640 GO:0005524|GO:0016020
Lele16g1395 772 Gene3D ABC transporter type 1, transmembrane domain 369 593 IPR036640 GO:0005524|GO:0016020
Lele16g1395 772 SUPERFAMILY ABC transporter transmembrane region 26 336 IPR036640 GO:0005524|GO:0016020
Lele16g1395 772 CDD ABC_6TM_Pgp_ABCB1_D2_like 411 585 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1395 Lele-ChrLele16 7943573 7952000 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1395 17 615 Calmodulin-binding Proteins AT2G36910 23.328 4.13e-24 107