Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1387 ATGCTGGCTCTTGATTTGGACACTGGGAATATCACGTGGTACCGTCAATTGGGAGGCTACGAAGTTGGGATCCTTGCATGTGCCTTTCCTTCGACTGCTCCTCCAGAGTGTCCTCCACCAGACATTGTTGTGGCTGTCCAAAAGAACGGTATTGCATGGGCTTTGGATCGCCACAACGGGAATCTCGTTTGGGCTACGGATCCTCAACCGCAGACGGACCTATTTTTGCGATCAATGCAAAGACTGGTGACATTCTCTGGTCCTTCAACACGAACGCCACTGACTACGGAGGCTCCTCCGTCAACAATGGCTGCATCTACATTGGTCATGGATACTTTGTGGGCCTCGCCCCCTTCTTCACCCAAGGAACCCATGTTTTTGCCTTCTGCCTTTGAACATACGAGTATTTATGTGGTGGAATTATTATTCTACAAGGTACGCGTTAACGTGGCTGGTCAGCTTCTCACTGGCGGGATATTGTTTATTGATGGGAAAACTCATAGGATCATGACGGGGATCTGAGCTTCGAAGAGGCTAGGGCAATCTAGATACTTGTCCCTGTTGTTTAATTCCTCCCCATTGTCGAATATTTATGGAGGCAAATCATTAGAATTAGAAAGTAGACTAATTTGTCGTCGCATTGCTCTGAGCCTTGCATTGTTCCGTTCTCAACCGCGCCAAAACAGCAAAGAAAACAGTCGCATGGATTTGACTCAATACCCTCCAGAGCTAATAAGGAACTTCTCTATAATTGCACATATAGATCACGGCAAGTCCACTCTTGCTGATCGGCTGTTCGAGCTTGCGGGGACTATTAAGAAGGGACATGGTCATCCTCCGTATCTTGACAAGTTGCAGTTAGAAATGTCATATGTAGAAAGAGAAAGGGGTATCACAGTTAAAGCCCAGACAGCAACAATGTTCTATAAGTACAGCATTCACGAAGCCACACGTAGTGACGACCAAGGTCCAGCTAACTTTCTGCTAAATCCTATTGATGCTCCCGGGCACGTGGACTTCAGTTATGAAGTGTCGAGATCACTGGCAGCTTGTCAGGGCGCTCTTTTAGTTGTCGATGCTTCTCAAGGAGTGCAAGTGCAAACTGTTGCTAATTTTTATCTTGCTTTTGAATCCAACCTCACAATTACTGTATATATAAATTCATTTTCTGTCAGTTCAGCTGGTGGGTTGTGTGGTTTCTTAGGCTTACTACACATGGATGTTTTTCATCAGCGGCTCGAACAGGAGTATGGAGCTCATGTTATCTCAACTGTTCCAACTGTACCATATATATTTGAGTATTCTGATGGAAGGTATGTGGGGCCTGTTATTACCCTTTGCTCTGAGAGAAAAGGCCAGCAATTGGAGTACTCATTCATTGACAGTCAAAGGGCATTCATGAAGTATCGCTTGCCTTTGAGGGAAATTGTTGTCGACTTCTACAATGAATTAAAGAGTCTAACAGCAGGCTATGCTTCATTCCATTATGAGGATGCAGATTATGTGATGCTTGTTAATCTAAACAAGTGTAACAAGCCTACAACGGCTGATGGAAAGGACTGTTCTAATTTGCAAGTTATCTTCATTTATCAGGAATCTCATCTGGTGAAACTTGACATTCTGTTGAATGGACAACCAGTTGATGCAATGGCAACCATTGTTCATAAGTTGAAAGCGTATCGAGTAGGGCGTGAACTGGTGGATAAATTGAAGAAAGTTATAGACAAGCAAATGTTTGAGATAACCATACAAGCTGCTATTGGGTCAAAAGTTATAGCAAGGGAGACGATTTCAGCAATGAGGAAAAATGTTCTTGCCAAGTGTTATGGCGGTGATGTTATTCGGAAGAGGAAGCTATTGGAGAAGCAAAAAGAAGGAAAGAAGAGAGGCATTTCATGA 1899 0.4376 MLALDLDTGNITWYRQLGGYEVGILACAFPSTAPPECPPPDIVVAVQKNGIAWALDRHNGNLVWATDPQPQTDLFLRSMQRLVTFSGPSTRTPLTTEAPPSTMAASTLVMDTLWASPPSSPKEPMFLPSAFEHTSIYVVELLFYKVRVNVAGQLLTGGILFIDGKTHRIMTGIXASKRLGQSRYLSLLFNSSPLSNIYGGKSLELESRLICRRIALSLALFRSQPRQNSKENSRMDLTQYPPELIRNFSIIAHIDHGKSTLADRLFELAGTIKKGHGHPPYLDKLQLEMSYVERERGITVKAQTATMFYKYSIHEATRSDDQGPANFLLNPIDAPGHVDFSYEVSRSLAACQGALLVVDASQGVQVQTVANFYLAFESNLTITVYINSFSVSSAGGLCGFLGLLHMDVFHQRLEQEYGAHVISTVPTVPYIFEYSDGRYVGPVITLCSERKGQQLEYSFIDSQRAFMKYRLPLREIVVDFYNELKSLTAGYASFHYEDADYVMLVNLNKCNKPTTADGKDCSNLQVIFIYQESHLVKLDILLNGQPVDAMATIVHKLKAYRVGRELVDKLKKVIDKQMFEITIQAAIGSKVIARETISAMRKNVLAKCYGGDVIRKRKLLEKQKEGKKRGIS 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1387 632 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 240 391 IPR027417 -
Lele16g1387 632 Pfam Elongation factor Tu GTP binding domain 245 387 IPR000795 GO:0003924|GO:0005525
Lele16g1387 632 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 2 70 IPR011047 -
Lele16g1387 632 Pfam GTP-binding protein LepA C-terminus 542 629 IPR013842 -
Lele16g1387 632 PRINTS GTP-binding elongation factor signature 346 357 IPR000795 GO:0003924|GO:0005525
Lele16g1387 632 PRINTS GTP-binding elongation factor signature 247 260 IPR000795 GO:0003924|GO:0005525
Lele16g1387 632 PRINTS GTP-binding elongation factor signature 295 303 IPR000795 GO:0003924|GO:0005525
Lele16g1387 632 PRINTS GTP-binding elongation factor signature 330 340 IPR000795 GO:0003924|GO:0005525
Lele16g1387 632 Gene3D - 1 154 - -
Lele16g1387 632 Gene3D - 534 608 IPR038363 -
Lele16g1387 632 PANTHER TRANSLATION FACTOR GUF1-RELATED 438 502 IPR006297 GO:0005525
Lele16g1387 632 Pfam Elongation factor G C-terminus 437 501 IPR000640 -
Lele16g1387 632 FunFam Translation factor GUF1, mitochondrial 534 608 - -
Lele16g1387 632 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 243 485 IPR000795 GO:0003924|GO:0005525
Lele16g1387 632 CDD lepA_C 439 501 IPR035654 -
Lele16g1387 632 SUPERFAMILY EF-G C-terminal domain-like 390 429 IPR035647 -
Lele16g1387 632 SUPERFAMILY EF-G C-terminal domain-like 437 503 IPR035647 -
Lele16g1387 632 Gene3D - 233 389 IPR027417 -
Lele16g1387 632 Gene3D - 431 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1387 Lele-ChrLele16 7897395 7902971 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1387 245 368 Eukaryotic Initiation Factors Gene Family AT1G56070 44.094 3.21e-20 93.6