Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1386 ATGGACACGTGTCTGCTGGGTAATGTTCCATTGAGGAACAAAGCTCTTTGCTTCTCAAGTTCCAACTCAAACGCCACATATTGCACCACGAATCTGCATCTATCTCATACATATATTCATGATCATGAACACACACGATTTGATGATGCGCGAGGGCTTCTGAAGAAAGATAAGTGGTGCAATGCAACTACTGGAGAGAAGAGAACAATTTCCATTTTCCTTGAGGAAGATTGCTGTGTTCAAGAGGTTAGCAACTGCAATCCTTTGCATCTTCTATTTCGACCATCATATCAGAATGTTTCTCAGGGTGTGCATTTAGATATGGATCGTATCTTGTATCAACAGGGTTGTATAAGTATTCATGATAATAAGAATGATGAACTCAAGTCTTCTAAAGAAGAGATAGGTGGGGTGGAAGAAGAAAATGAAGAAAGGTTGAAGATGATGATGAACCGAGTGGAAAAGGATTACCAGTCCCTCCAGCTGCGTTTCTTTGATATCTTGAGCAGAGAAGCTTCTGAAGAAAGCATAGCAGATTCAGCTAATACCCCTGATGAAACTGAAGAGCCTGAGCTCGCGTCACTTTGCCTGGGAAGAAGTCCAAGTGACCCTAAAAAGGATACCAGAATCGGAAACACCACTAAACCTAAAGAAAGTGAAGATATGGAGGCTTGCCTTACCCTTGGATTAGACTCCAATTGTGAGTTATCAATGGAGATGGCGTCTGATCAGAGCCCAGGAAACAACTCAGGAGAAACTAAGGAAGCAGAAATAGGGGGAACATGGCAATCAAATAAATCTGTCAATGCCAAAAATGGAGAAGATGAAATTTCAGAGCAGTTACCTGCTAAGAAAGCGAGGGTTTCTGTGAGAGCAAGATGCGACACCCCTACGATGAGTGATGGGTGCCAGTGGAGAAAATATGGACAGAAGATAGCCAAAGGGAATCCTTGTCCGCGTGCATACTATCGCTGCACGTTTGCACCAGCATGTCCAGTCAGAAAACAGGTGCAAAGATGCGCTGAGGACATGTCCATCTTAATCACTACATATGAAGGGACCCACAACCACCCACTTCCAGTTTCAGCCACAGCCATGGCTTCCACCACTTCAGCTGCAGCTTCCATGCTATTGTCGGGTTCTTCAACATCTCAGCCTACAGATAACAGTTTTGCTTTTGCATCATTTGCAAATGCTCCTACACTGCTTAATGCCTCAAACCTCGGACATTTTGATGTATCAAAAGCAAAACAGGTCTTCTTGCCCAACCCTGCCTCACCTCTGTTCCCAACAATCACTCTAGACTTAACTTCTGCTTCATCCTCATCAACCCATATCAATAATCGTCCCCCTTCAAACTTTGCTTTAAACCCCAGATTTCCTGCAACAAGTCTAAGTTTTTGCTCAAAGGAGCCCAACATTCAACAAGCAGTATGGGGTAATGGAATCCTTAATAATGAGAAAACCCACATGAGGTCAGTTGACCTGGAAAATCAATTTCAGCAACAGTTCCATCAAAACTGCGTGCAAAACCAAGCTCCTTCACGAGAGGCTTTAGCAGAAACCTTAACCAAAGCAATCAATACGGATCCAAGACTTCGATCGGTGATAGCTGCAGCAGTTTCATCTATAGTGGGTCAAGGATTCGCCAATGTGAACCAGCCAGGGGGAGGGGAAATTTCAGAGTTAGGGTTGAACTTGAAACTAGGACAACATTCTCAGTTTGCTTCTTCCAATCCGTTGACCCAAAATGGGAAAGGATGCTTACCAGGTTTTTCCAACAGATTGTCATCAAATTCCTTTACTGGAAACTTCATGCCTCTCCAACCTCCAGTTCAGTTTTCTGCATCTAAGAAAAGCGTGCCTCCTACCATTAGTGATCAGATCAATCATTAA 1896 0.4346 MDTCLLGNVPLRNKALCFSSSNSNATYCTTNLHLSHTYIHDHEHTRFDDARGLLKKDKWCNATTGEKRTISIFLEEDCCVQEVSNCNPLHLLFRPSYQNVSQGVHLDMDRILYQQGCISIHDNKNDELKSSKEEIGGVEEENEERLKMMMNRVEKDYQSLQLRFFDILSREASEESIADSANTPDETEEPELASLCLGRSPSDPKKDTRIGNTTKPKESEDMEACLTLGLDSNCELSMEMASDQSPGNNSGETKEAEIGGTWQSNKSVNAKNGEDEISEQLPAKKARVSVRARCDTPTMSDGCQWRKYGQKIAKGNPCPRAYYRCTFAPACPVRKQVQRCAEDMSILITTYEGTHNHPLPVSATAMASTTSAAASMLLSGSSTSQPTDNSFAFASFANAPTLLNASNLGHFDVSKAKQVFLPNPASPLFPTITLDLTSASSSSTHINNRPPSNFALNPRFPATSLSFCSKEPNIQQAVWGNGILNNEKTHMRSVDLENQFQQQFHQNCVQNQAPSREALAETLTKAINTDPRLRSVIAAAVSSIVGQGFANVNQPGGGEISELGLNLKLGQHSQFASSNPLTQNGKGCLPGFSNRLSSNSFTGNFMPLQPPVQFSASKKSVPPTISDQINH 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1386 631 FunFam probable WRKY transcription factor 31 284 361 - -
Lele16g1386 631 Pfam WRKY DNA -binding domain 301 358 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele16g1386 631 SMART WRKY_cls 299 359 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele16g1386 631 Coils Coil 143 163 - -
Lele16g1386 631 MobiDBLite consensus disorder prediction 175 222 - -
Lele16g1386 631 MobiDBLite consensus disorder prediction 202 222 - -
Lele16g1386 631 MobiDBLite consensus disorder prediction 240 271 - -
Lele16g1386 631 ProSiteProfiles WRKY domain profile. 294 360 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele16g1386 631 Gene3D WRKY domain 284 361 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele16g1386 631 SUPERFAMILY WRKY DNA-binding domain 292 360 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele16g1386 631 MobiDBLite consensus disorder prediction 240 284 - -
Lele16g1386 631 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 122 554 IPR044810 GO:0003700
Lele16g1386 631 Coils Coil 121 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1386 Lele-ChrLele16 7889982 7895982 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1386 138 604 WRKY Transcription Factor Family AT5G15130 41.968 6.47e-81 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele16g1386 WRKY 4.5e-24 CL0274