Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1373 ATGGAAGGTTCCGGGAGGAAGATAACGCTTGGAGTCTGCGTAATGGAAAAGAAGGTGAAATATGGCCTTGAGGTTTTCTCGGCGCCTATGGGGAAGATTCTCGAGAGGTTGCAAGCCTTTGGTGAATTTGAGATAATATATTTTGGAGATAAGGTCATCCTGAAAGATCCTATAGAGAGCTGGCCAGTATGCGTCTGTCTGATTGTTTTCTGTTCCTCCGGATATCCCCTCGAAAAGGCTGAGGCATATGTGGCTTTAAGGAAGCATTACAGTGCAGAGACAATCCGAAGGGCATTGAATCTGGGAGTAAACGTTAAAATGATAACAGGTGATCAACTAGCAATAGCAAAGGAAACAGGACGCCATCTGGGAATCGGAATCAACATGTACCCTTCATCAGCTTTAATGGGACAAAATAAGGATCCAGCAATTGATAGTTTGCCAGTTGATGAACTGATTGAAAAAGCTGATGGTTTTGCTGGTGTCTTCCTGCGCTTACAAGCTAGGAAAGACATATGTGGAATGACTGGTGATGGTGTTAATGATGCCCCAGCTCTTAAGAAAGCAGATATTGGAATGGCTGTTGCTGATGCAACTGATGCAGCTCGCAGTGCTTCTGACATTGTTCTCACAGAACCAGGCACCATTATGACAATATCGAAGGACAGGGTGAAACCATCTCCACATCCAGATAGCTGGAAACTTGCAGGGATATTTACTAGAATTATTCTTGGCGGTTATTTGGCTATGATGACTGCCATCTTCTTTTGGGCTGCATATAAAACAGATTTTTTCCCTCGTACATTTGGGGTTTCAAGCCTACAGAAGAAGGACGAAGATTACTTCAGAAAGCTTGCCTCAGCAATATACCTACAAGTCAGTATAATCAGCCAGGCCCCCATATTTGTTACCCGAGCTCGGAGTTGGTCTTTCATAGAGCGTCCGGGTTTGTTACTTGAAACAGCTTTTGTTGCTCAGCTGATAGCTACACTGATTGCAATGTATGCAAATTGGAGTTTTGCTGCGAATGAAGGGATTGGACGGGGTTGGGCTGGTGTTGTTCGGCTTTATAACCTCATCTTCTATTTCTCACTTGATTTAATGAAGTTTGTGATTCGATACTCCTTAAGTGGCAGGGCTTCGGATCTTGTTATTGAGAGAAAGATTGCATTTACAAGAAGGATTTTGGAAAGGAAGAACGTGGACTTAGATGGGCACGTGCACAGAGGACCCTCCATGAACTTCACCCACCTGATACAAAGATGTTCAGTGAGCGTACGAGTCATGCAGAACTCAATCAGATGGCTGAAGAAGCTAAGAGAAGAGCTGAGATTGCTAGATTGTACTTCCTCGTCCCAACCATGTTATTCATCTCCTTTCGTTTCTTCAACACAAATGTCGGCATCGCATCTATCTGGAATTTCTGATCCACATCCTAATGTGTCTTCCCAGAGAAAGAAGAGGGGAAGAATGAAAGGAAATTCTACGTTGAAACTGGAACAAATGACTGAAACATGGAGATTCCAACTCATTGACGTCGATGAAGAATTCTACGTTAGTGTCTCTGCCGATCTATTCAGGGAAAAGAAACCAAAGGAAATTCAGAGACACGTGGAATAA 1620 0.4333 MEGSGRKITLGVCVMEKKVKYGLEVFSAPMGKILERLQAFGEFEIIYFGDKVILKDPIESWPVCVCLIVFCSSGYPLEKAEAYVALRKHYSAETIRRALNLGVNVKMITGDQLAIAKETGRHLGIGINMYPSSALMGQNKDPAIDSLPVDELIEKADGFAGVFLRLQARKDICGMTGDGVNDAPALKKADIGMAVADATDAARSASDIVLTEPGTIMTISKDRVKPSPHPDSWKLAGIFTRIILGGYLAMMTAIFFWAAYKTDFFPRTFGVSSLQKKDEDYFRKLASAIYLQVSIISQAPIFVTRARSWSFIERPGLLLETAFVAQLIATLIAMYANWSFAANEGIGRGWAGVVRLYNLIFYFSLDLMKFVIRYSLSGRASDLVIERKIAFTRRILERKNVDLDGHVHRGPSMNFTHLIQRCSVSVRVMQNSIRWLKKLREELRLLDCTSSSQPCYSSPFVSSTQMSASHLSGISDPHPNVSSQRKKRGRMKGNSTLKLEQMTETWRFQLIDVDEEFYVSVSADLFREKKPKEIQRHVE 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1373 539 Gene3D - 212 375 - -
Lele16g1373 539 SUPERFAMILY HAD-like 89 213 IPR036412 -
Lele16g1373 539 PANTHER CALCIUM-TRANSPORTING ATPASE 88 214 - -
Lele16g1373 539 MobiDBLite consensus disorder prediction 469 495 - -
Lele16g1373 539 FunFam Plasma membrane ATPase 77 224 - -
Lele16g1373 539 PRINTS P-type cation-transporting ATPase superfamily signature 101 111 - -
Lele16g1373 539 PRINTS P-type cation-transporting ATPase superfamily signature 199 211 - -
Lele16g1373 539 PRINTS P-type cation-transporting ATPase superfamily signature 176 195 - -
Lele16g1373 539 Pfam haloacid dehalogenase-like hydrolase 89 190 - -
Lele16g1373 539 Gene3D - 88 211 IPR023214 -
Lele16g1373 539 Pfam Diphosphoinositol pentakisphosphate kinase 2 N-terminal domain 8 94 IPR040557 -
Lele16g1373 539 SUPERFAMILY Calcium ATPase, transmembrane domain M 216 376 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1373 Lele-ChrLele16 7816630 7820757 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1373 88 394 Primary Pumps ATPases AT3G42640 50.265 1.53e-99 320