Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1369 ATGATGACAATTAAAGGAGGCTCAAAGAAGGCCTGCGCTCCATGCAAGTATCGGAGAAGAAGATGCTCAAAGGAGTGCCCTCTGGCTCCCTATTTCCCTTCAGATCAGCCTAGAAAGTTCAGCAACGCTCACCGTTTGTTTGGTGTCGCCAACATCAAGAAGATTCTGGATCAGGTAGAGCCAAGGCAGAGAGACGAAGCCATGAAATCTATTATCTTTGAATCTGATATACGAGAACAGTTTCCTGTTATGGGCTGTCTAGAAGTCATATGGAGCTACAATAATCAGATATGCTCTCTCATGGAAGAGCTACGTTATCTGAAACTGAGGCTCGCCTTTTACAAAGAACAGTTTTATTATCATATTTCTGAGCAAATTTCTCCTTGTACACCGATGGAATCTATGTCTGCAGTTAGTACAGACATGTTGTCGATGATGTCGAATCACTTGGCATATAATAACAATAACACTGAAGGTGTTATATTTGATGGTGGTGGCTCCGGAGATGAAATGTTTGGTCTTCAACAATCCTTCAATTCCATGACCGCACAATCATCTAATTTCATACCCAACCAATCATAA 582 0.4158 MMTIKGGSKKACAPCKYRRRRCSKECPLAPYFPSDQPRKFSNAHRLFGVANIKKILDQVEPRQRDEAMKSIIFESDIREQFPVMGCLEVIWSYNNQICSLMEELRYLKLRLAFYKEQFYYHISEQISPCTPMESMSAVSTDMLSMMSNHLAYNNNNTEGVIFDGGGSGDEMFGLQQSFNSMTAQSSNFIPNQS 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1369 193 Pfam Lateral organ boundaries (LOB) domain 11 107 IPR004883 -
Lele16g1369 193 ProSiteProfiles LOB domain profile. 10 111 IPR004883 -
Lele16g1369 193 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 10 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1369 Lele-ChrLele16 7802637 7803218 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1369 2 115 AS2 family AT3G47870 52.632 1.28e-38 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele16g1369 LOB 3.3e-35 No_clan