Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1359 ATGGCAAAATATTCGCTGGATCCCCGGAATGGTTTTCTGTTACTGCTCTGTAGTTTGGCGGTTCTATGGTGTTTTGCTGCGTCGCAGGCTGAAGATGATGTGCAATGCCTTAAAGGCATCAAGAGCTCTTTCAGTGATCCTCAGGGGAAGCTTGCTTCTTGGCGTTTTGATAACGACACCGCCGGTTTCATATGCACGTTCGTCGGCGTTACGTGCTGGAACCCCCAGGAGAATAGGGTCCTCAATCTGGAGCTCCGGGATATGAAACTCTCGGGCCAGGTGCCGGAGTCGTTGAAGCATTGCGGTAGGAGTCTGCAGAAACTGGATCTCGGGTCCAACGACGTTTACGGTACGATCCCTTCTCAGATATGCTATTGGTTGCCATTTCTAGTGACACTGGACTTGTCTGATAATCATGTCTCTGGGCAAATACCTCCTACTCTTGTGAACTGCAGTTACTTGAATACCCTGATTCTTTCCAATAATCAACTTTCGGGTGCTCTTCCTTTCGAATTTGGGAGTTTGGCTAGGCTTAGGACATTTTCTGTTGCTAATAATCATCTTACTGGTACGATTCCTTCGTATTTAAGTGGCTATGACGAGAAAGATTTTGCTGGGAATAGTGGACTTTGTGGGGCTCCCCTTGGATCCAATTGTCGTGGGTTGAGTAAGAAGAATGTTGCTATTATCATCGCTGCTGGGGTCTTTGGTGCTGCTGCTTCTTTATTATTGGCTTTTGGATTGTGGTGGTGGTATCATTTGCGGCTGGCTAGGAAGAAGAGAGGATTTGGGGTTGGAAGGAATGATTATTGGTCTGCGAGGCTGAGGGGTCACAGACTTGTTCAGGTTACTTTGTTTCAGAAACCCCTTGTGAAGGTTAAACTAACAGATTTGATGGCGGCTACGAATAATTTCAATTCTAAAAGTATCATCATGCGTTCAAGAACAGGGACTACCTATAAAGCAGACCTTCCTGATGGTTCAACACTTGCAGTTAAGCGGCTAAACACCTGTAACTGTAAGATTGGAGAAAAGCAGTTTCGCATGGAGATGAGTCGGCTAGGGCAAGTCAGGCATCCGAACTTGGCACCCCTTTTAGGTTTCTGTGTGGTTGAAGAGGAAAAACTTCTGGTTTATAAGCACATGTCAAATGGAACTCTGTCTTCGCTGTTGCATAAAGATGGTACTGGATCGGAATTGGATTGGCCAATGAGATTCAGGATAGGCTTTGGTGCCGCCAGGGGTCTTGCTTATCTGCATCATGGGTGTCATCCTCCGATAAGACACCAAAACATCTGTTCTAATGTGATAGTTGTTGATGAAGATTTTGATGCTCGATTAATGGACTTTGGACTTGCTAGGCTTATGACATCTGATTCCAATGATAGTAGCTTTGTGAGTGGGGACTTGGGGGAACTTGGCTATGTAGCTCCTGAATATCCAAGCACCTTTTTTGCTTCTCTAAAATGGGATGTGTCTGGATTTGGGGTTGTGCTTTTGGAGTTGGTCACTGGTCGCAGACCTCTTGAAGTTGGCAACGGAGAGGAAGAGTTTAAGGGTAACTTAGTTGATTGGGTGAATATGCTTTCTAGTTCTGGTCGAATTAAGGATTGTATTGATAGGACCATATGTGGAAGAGAGCATGACGAGGATATTTTGCAGCTTCTGAAAATTGCATGTAATTGTGTGGTTTCTCGTCCCAAGGACAGGTGGTCCATGTACCAGGTTTATCATTCTTTGAAGAGTTTGTTCAAAGGCTACAATTTCACTGAACATGATGATGAATTTCCATTGATTTTTAATAAGCCAGAGTGGGCATAA 1821 0.447 MAKYSLDPRNGFLLLLCSLAVLWCFAASQAEDDVQCLKGIKSSFSDPQGKLASWRFDNDTAGFICTFVGVTCWNPQENRVLNLELRDMKLSGQVPESLKHCGRSLQKLDLGSNDVYGTIPSQICYWLPFLVTLDLSDNHVSGQIPPTLVNCSYLNTLILSNNQLSGALPFEFGSLARLRTFSVANNHLTGTIPSYLSGYDEKDFAGNSGLCGAPLGSNCRGLSKKNVAIIIAAGVFGAAASLLLAFGLWWWYHLRLARKKRGFGVGRNDYWSARLRGHRLVQVTLFQKPLVKVKLTDLMAATNNFNSKSIIMRSRTGTTYKADLPDGSTLAVKRLNTCNCKIGEKQFRMEMSRLGQVRHPNLAPLLGFCVVEEEKLLVYKHMSNGTLSSLLHKDGTGSELDWPMRFRIGFGAARGLAYLHHGCHPPIRHQNICSNVIVVDEDFDARLMDFGLARLMTSDSNDSSFVSGDLGELGYVAPEYPSTFFASLKWDVSGFGVVLLELVTGRRPLEVGNGEEEFKGNLVDWVNMLSSSGRIKDCIDRTICGREHDEDILQLLKIACNCVVSRPKDRWSMYQVYHSLKSLFKGYNFTEHDDEFPLIFNKPEWA 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1359 606 Pfam Leucine rich repeat N-terminal domain 30 73 IPR013210 -
Lele16g1359 606 CDD STKc_IRAK 311 583 - -
Lele16g1359 606 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 82 582 - -
Lele16g1359 606 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 30 220 - -
Lele16g1359 606 SUPERFAMILY L domain-like 30 201 - -
Lele16g1359 606 Gene3D Transferase(Phosphotransferase) domain 1 382 600 - -
Lele16g1359 606 Gene3D Phosphorylase Kinase; domain 1 266 381 - -
Lele16g1359 606 ProSiteProfiles Protein kinase domain profile. 305 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele16g1359 606 SUPERFAMILY Protein kinase-like (PK-like) 283 580 IPR011009 -
Lele16g1359 606 FunFam Inactive LRR receptor-like serine/threonine-protein kinase BIR2 266 381 - -
Lele16g1359 606 Gene3D Ribonuclease Inhibitor 30 221 IPR032675 -
Lele16g1359 606 Pfam Protein tyrosine and serine/threonine kinase 326 579 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1359 Lele-ChrLele16 7759657 7761477 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1359 1 604 Receptor kinase-like Gene Family AT3G28450 62.316 0.0 758
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Lele16g1359 PK_Tyr_Ser-Thr 3.3e-25 CL0016