Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1347 ATGCTCGGCGGCCCCTACTACAATGTCTACCTGGGTCGCAGGGACGGCCGCGTTTCCATGGCTTCCTCTGTTGAAGGCAATCTCCCGAGACCAACCATGCCTATGTCGCAGATCATCCAGATCTTCTACTCCAGAGGATTCTCCGTCCAAGAAATGGTGGCTCTGAGCGGAGCCCACACCATCGGATTCTCCCATTGCAGCGAAATCAGCAGAGACATCTACAATTACAGCACCTCTTCCCTTTACGATCCTAACTACAACCCCCGATTCGCGCAGGGGTTGCAGAAGGCATGCGCAGATTACAGGAAGAATCCTACCTTATCCGTGTTCAATGACATAATGACCCCCAATAAGTTCGATAATGTGTATTTCCAGAACCTCCCAAAGGGTTTGGGGGTTTTGAAATCGGATCACGGGTTGTACAACGACCCGAGAACGAGGCCATTCGTGGAGCAGTTTGCGGCGGATGAGAACAAGTTCCTCCAGGCGTTTGGACAGGCAATGCAGAAACTGAGTGTCTTGGGAGTGCAGACCGGAAGGAGAGGAGAGATCAGGCGAAGATGCTGGAGGGTCAGGAATCATGAGACCCTTTTGATTACTGCGGGGGGCAACCTCCCTCGTCAATTTGACGATCTTATGAGTCCCACAATTGCCCCAGATCAGACCACAACAGCAGGAAGGTGCCTCAAGCATCGGTTTCCTGCGGATCACGCATGTAAGGGAGTAACCTCGTATTCTTCGTCATCACCAGAAGCTCCTGCAAATGGGGGTTGCTTGGATCGATTATTGGCTGCTCTGACTTGGAGGAATGGGGACCAATGTTCCAAAAGCAGGGGACCAATTTGGACCACATTAGGAGGAGACTAG 867 0.5202 MLGGPYYNVYLGRRDGRVSMASSVEGNLPRPTMPMSQIIQIFYSRGFSVQEMVALSGAHTIGFSHCSEISRDIYNYSTSSLYDPNYNPRFAQGLQKACADYRKNPTLSVFNDIMTPNKFDNVYFQNLPKGLGVLKSDHGLYNDPRTRPFVEQFAADENKFLQAFGQAMQKLSVLGVQTGRRGEIRRRCWRVRNHETLLITAGGNLPRQFDDLMSPTIAPDQTTTAGRCLKHRFPADHACKGVTSYSSSSPEAPANGGCLDRLLAALTWRNGDQCSKSRGPIWTTLGGD 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1347 288 Gene3D Peroxidase, domain 2 29 171 - -
Lele16g1347 288 FunFam Peroxidase 29 171 - -
Lele16g1347 288 Gene3D - 1 190 - -
Lele16g1347 288 Pfam Peroxidase 2 156 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele16g1347 288 PANTHER - 1 191 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele16g1347 288 PRINTS Plant peroxidase signature 126 143 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele16g1347 288 PRINTS Plant peroxidase signature 110 125 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele16g1347 288 PRINTS Plant peroxidase signature 3 18 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele16g1347 288 PRINTS Plant peroxidase signature 50 62 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele16g1347 288 PRINTS Plant peroxidase signature 166 179 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele16g1347 288 PRINTS Haem peroxidase superfamily signature 51 66 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele16g1347 288 PRINTS Haem peroxidase superfamily signature 3 15 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele16g1347 288 PRINTS Haem peroxidase superfamily signature 112 127 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele16g1347 288 ProSitePatterns Peroxidases proximal heme-ligand signature. 51 61 IPR019793 -
Lele16g1347 288 SUPERFAMILY Heme-dependent peroxidases 2 191 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lele16g1347 288 ProSiteProfiles Plant heme peroxidase family profile. 1 192 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1347 Lele-ChrLele16 7664157 7666303 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1347 2 188 Peroxidase AT3G28200 63.102 1.61e-83 252