Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1338 ATGGAACGATTTTCCATGGTGATCATCTTCGTATCGTTATTTCTCCTCCTGAACACTAGCAGTTGTTTTGAGGACGAGGTTAGCAGCACACTGATCAACTTTCTTGCAAAACTCTCTCACAACAATGGACTCCGGAACTCTAATTTGGTCTGGAAGCCAGGCTCTGATCCCTGCAAGGACTTTTGGCTAGGTGTGGTATGTGATGATGAAAATGCATCAGTGCAGAAGCTATTTCTTAACAAGTCCAATTTAGCTGGAACTCTTGATGTTGCTATGCTTTGCAACTTGCAGCCCCTCGTCGCGTCTCTTACATCTCTTAACCTCGACGGCAACAACATAAGTGGAGGATTAGCAAATGAGGTTGGAAACTGCAAGCATCTCACTCACTTGAATGTAAGTGGTAACCAACTTTCTGGGGTCCTTCCTAGCTCACTTGCCATGTTGGGTAACTTAAAAGAACTCGACATCTCCAACAATAGGTTCTCCGGGAACTTGCCAAACATGTCCACAATCTCCGGACTGAATGCCTTTTTGGCACAAGAAAATCAGCTCAATGGGGAGATACCCCCTTTGAACTTTTCCAAATTTGACTACTTCAATGTGTCCTTCAACAATCTAAGTGGCCGTATTCCAGATTTGCAAAACCATTTCTCTGCGGATAGTTTCTTAGGAAATCCCGAGCTTTGTGGAAACCCTTTGCCAAAGAACTGTTCATCTCTCCCTATATCTGATGTCAAACCATCTGATTCAGAAAAATCGAAGGGTCCTTCCCAAAGCCAGATTATTATGTATTCAGGCTATGCTGCGCTGTGTTTGGTCTTCATCCTTGTTGTAGTTATTGCGCTGTGTAGAAGAAACAAGACAGGAAACAAGGTTGAAGAAGAAAAGGAGGCAACTGATGACAGTACTACTGACAAACCTAGCTATGTTTCAAATGAATACAAATTAAGCGTGAGCAGACCAGAGTTTTCAGTCGCTACTGAAAGTGGGATGGTTTCACAATCACTTGTAGTTCTTTCAAGGCCAAATGTAAATGACATTAGATTGGATGACTTGATGAGGTCCCCTGCTAAACAAATTGGCCGAGGAAAGTTTGGTAGTCTTTATAAAGTGATGTTGGACAATGGGATGTTGTTGGTTGTTAAGAGGATTAATGACTTGACCATATCAAGCCGTGACTTCAAACAAAGAATGCGAATGCTTAGCCAAGTGAAGCACCATTCTGTACTCTCACCTCTCGCTTTCTATTGTTGCAAACAAGAGAAACTTTTGGTTTATGAACATCAAGAGAATGGAAGTTTGTTCAAGCTTCTACATGGTTCCTCAAGAGACTTTGATTGGACCAGTAGACTTGGGGTTGCAGCTACAATTGCAGAGGCATAA 1383 0.423 MERFSMVIIFVSLFLLLNTSSCFEDEVSSTLINFLAKLSHNNGLRNSNLVWKPGSDPCKDFWLGVVCDDENASVQKLFLNKSNLAGTLDVAMLCNLQPLVASLTSLNLDGNNISGGLANEVGNCKHLTHLNVSGNQLSGVLPSSLAMLGNLKELDISNNRFSGNLPNMSTISGLNAFLAQENQLNGEIPPLNFSKFDYFNVSFNNLSGRIPDLQNHFSADSFLGNPELCGNPLPKNCSSLPISDVKPSDSEKSKGPSQSQIIMYSGYAALCLVFILVVVIALCRRNKTGNKVEEEKEATDDSTTDKPSYVSNEYKLSVSRPEFSVATESGMVSQSLVVLSRPNVNDIRLDDLMRSPAKQIGRGKFGSLYKVMLDNGMLLVVKRINDLTISSRDFKQRMRMLSQVKHHSVLSPLAFYCCKQEKLLVYEHQENGSLFKLLHGSSRDFDWTSRLGVAATIAEA 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1338 460 MobiDBLite consensus disorder prediction 290 309 - -
Lele16g1338 460 Pfam Protein tyrosine and serine/threonine kinase 358 460 IPR001245 GO:0004672|GO:0006468
Lele16g1338 460 Gene3D Transferase(Phosphotransferase) domain 1 353 460 - -
Lele16g1338 460 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 91 188 - -
Lele16g1338 460 SUPERFAMILY L domain-like 44 218 - -
Lele16g1338 460 SUPERFAMILY Protein kinase-like (PK-like) 357 460 IPR011009 -
Lele16g1338 460 ProSitePatterns Protein kinases ATP-binding region signature. 360 382 IPR017441 GO:0005524
Lele16g1338 460 Gene3D Ribonuclease Inhibitor 21 237 IPR032675 -
Lele16g1338 460 Pfam Leucine rich repeat 102 161 IPR001611 GO:0005515
Lele16g1338 460 PANTHER OS05G0588300 PROTEIN 5 459 - -
Lele16g1338 460 ProSiteProfiles Protein kinase domain profile. 354 460 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1338 Lele-ChrLele16 7609463 7610927 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1338 36 458 Receptor kinase-like Gene Family AT1G60630 33.108 4.42e-52 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele16g1338 PK_Tyr_Ser-Thr 4.8e-09 CL0016