LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele16g1334	ATGGACTTGGAATCCGTAGTCCATCAAAATCCGACCAAGAAAGAATCATGGAAGACAGTTCTGACTCTGGCTTATCAAAGCTTGGGAGTGGTCTATGGAGATTTGAGCACTTCCCCTCTTTACGTCTATAAAAGCACTTTCGATGAAGATATTCGACATTCAGAAACGAATGAAGAAATATATGGGGTTCTGTCTTTTGTGTTTTGGACTCTCACACTGATTCCACTGGTCAAGTATGTCTTCATTGTGCTTCGAGCAGATGACAATGGCGAAGGAGGCACCTTTGCTTTATATTCTTTATTATGCCGACACGTCCGAGTTAGCTTGTTGCCTAACACACAGCAAGCTGATGAAGACTTAACGGAATATACCAAAGACGGGACTGTGCCGATCGATAAGAAGAATAATGTTGGGTGGGGCTTGAAATCTGTATTGGAAAAACATAGGGTTCTTCAGAGGGTGTTGCTTATTCTGGCTTTGATAGGGACTTGCATGGTTATTGGCGATGGCGTGCTCACACCAGCGATTTCTGTTTTTTCCGCTGTCTCAGGCCTTGAGCTTTCCATGTCTAAAGAGCAGCATCAATATGTTGAGGTGCCAGTGGCATGTATAATTCTGGTACTTTTGTTTTCCCTTCAACACTTTGGGACCCACCGATTGGGATTTCTGTTTGCTCCTGTCGTGCTGACGTGGCTGTTATGCATTAGTGCCATTGGTGTGTATAATATCTTGCATTGGAACCCACATGTTTATGAAGCTCTCTGCCCATATTACATGTTCAAGTTTCTCAGAAAGACACAGAGGGGAGGTTGGATGTCATTAGGTGGCATTCTTCTGTGTATAACTGGTTCTGAAGCTATGTTTGCTGATCTAGGACACTTTTCACAGCTGTCAATTAAGATTGCTTTCACCTTTTTAGTGTATCCTTCTTTAATCTTGGCATATATGGGACAAGCTGCGTATCTTTCCAAGCATCATATCTTGGAGAGTGACTATCGAATTGGGTTCTATGTATCTGTTCCTGAGAAGATTAGATGGCCTGTTCTTGCAATAGCCATACTTCAAGCTGTTGTTGGAAGCCAAGCTGTAATCACAGGGACTTTCTCAATAATCAAACAATGTTCTGCTTTGGGCTGCTTCCCCAAAGTCAAAATCATCCACACATCATCTAAAATACACGGCCAGATTTACATTCCAGAAATCAACTGGACTTTGATGCTTCTTTGCCTTGCCATCACCGTCGGATTTCGAGACACCAGACGCATGGGAAATGCAGCAGGGTTGGCTGTCATAACTGTGATGCTGGTAACTACTTGCCTGATGTCTCTAGTTATAATCCTGTGCTGGCGCAAAAGCATTTTGCTGGCGATTTGCTTTATATTCATCTTTGGCTCTATTGAAGCACTCTACTTCTCTGCGTCACTCATCAAGTTCCTTGAAGGGGCATGGGTCCCCATTGCCCTCTCTTTCACCTTACTCCTGGTCATGTGTGTGTGGCATTACGGCACACTGAAGAAGTATGAGTTTGATCTTCAAAACAAGGTCTCCATCAACTGGCTCCTCAATCTGAGCCCTACCTTTGGCATTGAAAGAGTCAGAGGAATTGGCCTCATACACACCGAGCTCGTATCAGGAATCCCAGCCATATTCTCTCAGTTCGTCACCAATCTGCCAGCTTTCCACGAGGTCGTCGTCTTCCTCTGCGTTAAATCCGTGCCGGTGCCTCATGTTAGAGCAGAAGAGAGGTTCTTGGTGGGGAGAGTTGGGCCAAAAGAGCATCAACTTTATCGGTGCATAGCGCGGTATGGTTACCGTGATTTCCACAAGGATGACACAGAGTTTGAGAACGACCTTGTTTGCAGCGTTGCAGAATTCATCATATCAGATAGTTTTGTTGAGAATGTCACAGGATTTGACAGCTTTGAAGCGGACGCAAAAATGACAGTTGTGGGGACTTCAGCTTCAAAACCGGAAGGTGTAAGAATGTGTGAAGAAAGAAACGGAGCAAGTTCTGAAATAGAAGGCACATCAGAGTTGAGGGAGGTGAATTGTCCGGAGAGGGTAAAGAAGAGAGTGAGGTTTGTTGTGCCAGAAAGTCCACGGATAAACATGGACGCAAGAGAGGAGTTGCGGAAGTTAATGGAGGCTAGGGAAGCAGGAATGGCGTTCATAATGGGTCACTCGTATGTGAAAGCAAAAAGAGGATCGAGCTGGATAAAGAAAGTAGTGATAAATTATGGGTTTGATTTTCTGAGGAGGAACTCGAGAGGACCAAGTTATGCTTTAAACATACCTCAAGCATCAACCCTAGAGGTTGGCATGATCTACCATGTGTAG	2337	0.4446	MDLESVVHQNPTKKESWKTVLTLAYQSLGVVYGDLSTSPLYVYKSTFDEDIRHSETNEEIYGVLSFVFWTLTLIPLVKYVFIVLRADDNGEGGTFALYSLLCRHVRVSLLPNTQQADEDLTEYTKDGTVPIDKKNNVGWGLKSVLEKHRVLQRVLLILALIGTCMVIGDGVLTPAISVFSAVSGLELSMSKEQHQYVEVPVACIILVLLFSLQHFGTHRLGFLFAPVVLTWLLCISAIGVYNILHWNPHVYEALCPYYMFKFLRKTQRGGWMSLGGILLCITGSEAMFADLGHFSQLSIKIAFTFLVYPSLILAYMGQAAYLSKHHILESDYRIGFYVSVPEKIRWPVLAIAILQAVVGSQAVITGTFSIIKQCSALGCFPKVKIIHTSSKIHGQIYIPEINWTLMLLCLAITVGFRDTRRMGNAAGLAVITVMLVTTCLMSLVIILCWRKSILLAICFIFIFGSIEALYFSASLIKFLEGAWVPIALSFTLLLVMCVWHYGTLKKYEFDLQNKVSINWLLNLSPTFGIERVRGIGLIHTELVSGIPAIFSQFVTNLPAFHEVVVFLCVKSVPVPHVRAEERFLVGRVGPKEHQLYRCIARYGYRDFHKDDTEFENDLVCSVAEFIISDSFVENVTGFDSFEADAKMTVVGTSASKPEGVRMCEERNGASSEIEGTSELREVNCPERVKKRVRFVVPESPRINMDAREELRKLMEAREAGMAFIMGHSYVKAKRGSSWIKKVVINYGFDFLRRNSRGPSYALNIPQASTLEVGMIYHV	778

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele16g1334	778	TIGRFAM	kup: potassium uptake protein	23	778	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Lele16g1334	778	Pfam	K+ potassium transporter	25	606	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Lele16g1334	778	PANTHER	OSMOTIC STRESS POTASSIUM TRANSPORTER	12	777	IPR003855	GO:0015079\|GO:0016020\|GO:0071805

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele16g1334	Lele-ChrLele16	7594337	7597889	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele16g1334	1	776	Inorganic Solute Cotransporters	AT5G14880	76.688	0.0	1222