Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1329 ATGGGATTCGTTATATCGGTGCTAGCGCTATTTGTGGGGTTAGGGGTCTTGATCCTAATTCATATCTGTTTAATTATGAGAGAATCCAGAAGAGGAGACAGAGGCACAACGACGGAGAGTGAAACCACCACCGAGGAAGCAAGAAGCATGTCGAAAGATGAAATAGAGAAGCTTCCTTGTTATAACTATGTAGCCAAAGGCAATGAAACTGGTACTGTAGAATGTGCGGTTTGCTTGGAGAATCTGGTTACAGGGGACAAGTGCAGATTATTGCATACATGCAAGCACAGTTTTCATGCCCACTGTTTGGATCAATGGCTTCTTCAGACACCCATTTGCCCTATTTGCAGGGCCACTGTTGGCTCTCAGGGGGAATACTTTGCTACTATAGATATAAATCACAATGACCATTTTGAGCCAAACAGTAGACATTTGAGAGAAAGCCCAGAAACTGGTTTTACAATGCAGTCCACAACAGAGAATTCAACGCCAGAAGGGTAG 501 0.4371 MGFVISVLALFVGLGVLILIHICLIMRESRRGDRGTTTESETTTEEARSMSKDEIEKLPCYNYVAKGNETGTVECAVCLENLVTGDKCRLLHTCKHSFHAHCLDQWLLQTPICPICRATVGSQGEYFATIDINHNDHFEPNSRHLRESPETGFTMQSTTENSTPEG 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1329 166 MobiDBLite consensus disorder prediction 147 166 - -
Lele16g1329 166 SMART ring_2 75 116 IPR001841 -
Lele16g1329 166 SUPERFAMILY RING/U-box 74 123 - -
Lele16g1329 166 Pfam Ring finger domain 74 117 IPR001841 -
Lele16g1329 166 ProSiteProfiles Zinc finger RING-type profile. 75 117 IPR001841 -
Lele16g1329 166 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 4 123 - -
Lele16g1329 166 MobiDBLite consensus disorder prediction 137 166 - -
Lele16g1329 166 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 49 125 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1329 Lele-ChrLele16 7576660 7577160 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1329 46 120 C3H Transcription Factor Family AT1G74410 41.333 6.54e-17 73.2