Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1328 ATGATGGAACTCACCGATTCCGGCGACGAACTCAGGGACCGCAAGCTGCCTCAGGATTCTCGCTCTGGACTCGGAATCGACCTCAATGAGATTCCCTCGCCTTCTTTTGCCGAAACCCTACCGGACTCCATCGACATCGTACGCGCCTACCACGAGAACCCGGCGCCTCCGCCCGGTGGACCGGCGGGGATTCCCGGTGACGTCCGCGGCTCCACTTGTGGTGCTTGTGGTAAGCCCGAGGCGCGGGGTCATGTTGTGGTCTGCGACGGGTGTGAGCGCGGCTACCATTTGGGCTGCGCGGGAATGCGTGGGCGCCAGGCCGTAAACCTTGACGAATGGGTCTGTGGAGAGTGTGTGTCCAGTGGGGTGAAGAGTAAGCGTTGGCCATTGGGTGTCAAGTCCAAGCATCTTTTGGATATCAATGCTTCGCCACCCAGCGATGCTGACGGCGAGGGTAGTGAAGAATTGCAGGATTTGAGAAAGCACGCTCAGGGTCATAATTCTTTCAGTGCCAACTCATTTGGTGCCCCATTGACATATTCAAACTGCTACAATGGTAATGCTATTGGCTTCCAAAGAGCATCTGGAGTTGTGACACATGCTCTTAGAGTGGGTTTTGAGGATGTATTGAATCGTATGCAATCAGTGAGTAGAAATTTTGAGGAGGTAGATATGGGTTTGCCTCCTGGAAGACACAGGAATAGTAAAAATACAGCTACCGGGAATCCAGGAGAGATAATTTTGCAAGCTCTTAGAGATTTTATATCTGAAAGGCATGGTGTTCTGGAGGAAGGTTGGAAAGTGGAGTTTAGACAACCAATGAGCAGCTCTGAGCTGCATTTTGTTTACCGTGCACCAGATGGAAAGATTTTTGATTCTGTGTTTGAAGTAGCATGTTATCTGGGATTGATGCCTGGCTACAACTCTCTGGAGTCTGAAACGAGGAATGATAGGCCTGTCTCTTCAGTAGGTGGGTCTCATTTTACCAGAAAAAGAAAGTCAACTAGACTTCCCGTTGCTAATGGCTTTGCTGAAAGAAGGGAAAGCTTTACCAATAGTTGTTTTAAAGATCCTCCTTCGGATGCTGCAAGTGCAAAGTGTGCTAATGCATGTGGGAACATATCAGAAGCCACATTAAGTGGAAGGAGAGAGGACGATCACTCTAGTCCTCAGCAATCTGCTGATGGACTTCCTTTACAGTTTGAAGATTTTTTTGTTCTTTCTTTGGGAAAGGTTGATGATAGACCTTCATATTGTGATGCTAACATTATTTGGCCCGTAGGTTATAAATCTTGCTGGCATGATAAAATTACAGGCTCCATTTTTACATGTGAAGTTCTGGATGGTGGTGATTCTGGACCTATATTTAGGGTCAGAAGGTGTTCATGTTCTGATTTTTCTATTCCAGTTGGGTCAACCATCCTTTCAATGTCCAACCTTTGTCAATTTGTGAGTCAAAGCAATGAAGGTGACGCAAAGATGAATGAGTGTATGGAATGTGATGTTGATGAAAGTATCCAGATGATCCTAGACGACTCTTGCAATCCAACTGAAAATGATGTCTTGAGTTGTCTTGAAAGTTGCTCTAGTGAAGCACATGATAGCCATACATTAGATGTATTGCAGTCTGCAGCTGGTCCAGGTCAAGATGAAACTCATAATTTGTCTGACGACTTGGGGTCAATTGGTGAGATGGTGGTGGAAGACTGTTCGTCATCCTCAGCATGGAAAGATATTTCCCAAAAATTAGTTAATGCTTGCAGTGAAATATGCAAGCAGAAAGGGACTTTAAAGCTCTATTGTAAACATGCTGAAAGTGAAACATGCGTACATAAATGGGACATATGGAATGGCAAAAATGAAACACACCCCACTTCATTTGCTAAATTTTGCGGGTCCCCTGCTCGTGGTATCCCGGACATGGTTCATGCAGATGATCTTGAAAGTTTGTATGGGGCCCTAAGAAAATGGTTGGAGCAGGATAGATTTGGGTTAGATGTTGAGTTTGTCCAAGAAGTACTTGAACTACTTCCTGGTGTTGAAGCATTCTCACAGTATGAATTTCTGAATACTAGAAGTAATGGGTCTTCTTTGCTAACAGTTGGAAGTGGGTTCTTAGTGGCTGATTGGAGAGACAGATCCCAATATCAGGAAGAAGCAGAGCAAGGTTTATATAGGAGACACAAGAAAGTAAAATTGGCCAAAGAATGCGTCAAGGAAGATCATTGTCCACCTCCCGGGAAGCCGCTATCCTCTAGGGTTCCTTTTGAACTTGTTGGTGATGTTTTTCAGGCTTGGGAGCTATTACGCAGATTTCATGAAATTTTGGGCCTGAAGGAACCTTTGTCATTGGATGAGATGGAGAAGGAACTCATCAACCCATGGTATAATGGATCAGTCTTTAGTGAAAAACTTGAGGGTGATGGCAGTGGTGGACCAATGTTATCCCCAGACTGTGAAGCTGCTCCTTCAATTTCTGCTGAAAGTCCCCATGCATTTATTCAAGTGGAAACTGAAGCCATGAAAGAGGCAGCTCAAGTTAAGCTTGCATCGTTCACTTACACAAGATGCTTTGGTGCATCTTTGACAAAGGCTCATAATTCCTTGCTGGAGGTTTTAATAGGTGAACTGCAATCCAAAGTGGCTGCCCTAGTGGATCCAAATTTTGATCCTGGAGAGCTGAGAACAAGACGTGGAAGAAGGAAAGACATAGATAGTACTGTTCCTGCCAGACGTGCCAAGCTCAATATGCTTCCTATTAATGAACTAACTTGGCCTGAATTGGCTCGTAGATACATATTAGCTGTCTTATCAATGGATGGTAACCTTGACTCACCAGAGATTACTGCACGGGAAAGTGGTAAAGTATTTCGCTGCTTACAAGGTGATGGTGGTTTGCTGTGTGGCTCCCTTACTGGTGTGGCTGGGATGGAAGCAGATGCATTGTTGCTTGCGGAGGCTACAAAGAAAATTTTTGGTTCTGTGAGCAGTGAAAGCGATGTGCTTACCTTTGAAGATGAGGAGTTAGATGCAAAGGATGCTTTTGAGAAAACTTCGTTGAATGATGGTAATATTCCAGAATGGGCACAGCTGCTAGAACCTGTAAGAAAACTACCAACAAATGTGGGAACCAGAATCAGAAAGTGCGTCAATGATGCCTTACTTAAGGATCCACCTGAGTGGGCTCGAAAAATACTGCAACACTCGATTAGTAAGGAAGTGTATAAGGGCAATGCATCTGGACCTACAAAGAAAGCAGTTCTTTCTGTGTTGGCCAATGTATGTGGTGAAGGATCGCAACTGAAGCCCAATAAAACAAGGAGAAAAAAGACTGTAATATCTATTTCTGACATTATCATGAAACAATGTCGTATTGTATTACGCCGTGCTGCTGCAGCAGATGATTCCAAGGTTTTTTGCAATTTGTTGGGACGAAAATTGATAAATTCTTCTGATAATGACGATGAAGGGCTTCTTGGATCTCCAGCCATGGTGTCCCGTCCTCTTGACTTCAGGACCATTGACCTCCGACTGGCTGCTGGGGCTTATGGTGGATTTCATGAAGCTTTTCTTGAGGATGTTCATGAGCTGTGGAACAATGTTCATATTGCTTTTGGGGATCAACCTGATTTAGTTGAGCTGGCTGAGAAATTATCTGAGAATTTTGAGGAGTTGTATGATAGTGAGGTTTTAACTTATGTGCAAAGGTTTGGAGAGTATGCCAAATTGGGAAACTTAAGTGTGGAAAAGAGAAAGGAAGTGGAAAATTTTCTTGCATCAGCTAGTGAAATTCCGAAGGCCCCTTGGGATGAGGGAGTCTGTAAAGTATGTGGTATTGATAGGGATGATGACAGTGTTTTGCTATGTGATACCTGTGATGCTGAGTATCATACTTATTGCTTGAATCCTCCGCTAGCAAGGATCCCTGAAGGAAACTGGTACTGCCCTTCTTGTGTTGACAGTAAACATGCAGTTCAAGATGTTCTACAAGGTTCAAAACCTATTGGCAAACCTAGAAGTACAAAATTCAAGGGGGAGGTTACTTCGCTTTACTTGGAGGCTCTATCTCATCTACTATCTGTAATGGAAGAAAAAGAATACTGGGAGTACAGTGTGGGCGAGAGAACTATCCTTCTCAAGTTTTTATGTGATGAGTTGCTCAATACTTCCCTCATACGCCAGCACCTTGAGCAATGTGCCGAGTCATCTGCTGAATCACATCAAAAGTTGCGTGCACTTTCTGCAGAGTGGAAAAGCCTGAAAATTAGAGAAGAAATATTATCCAGTAAAGCTGCAAAAATTGACACATGCTCAGTAGCATCTACTGGAGAAGTCCTCAAGGAGGGGCTTCCTGTATCAGTATCAAATCCTGGTAAATGCCTGGTTCAGCCACATAGTGCAAGTGACAGTCCTAACAATTTTGGGGTATTTTCTGATAGTTTGTATTTGGAAGAGATAAATAAAGAGAAAAATGGGTTTAACAGTGTTGATAAAAGTGTATCTACAACAAATTCAGAGACTGATAGTCAAAGCAGGAATATCACGAATGTGGAGGGACAGTTGAAGAATGTCTGTACAGCTGTGGACGGCAGTCAGTTGCCTATAAGTATGACTTCCTGTGTGGATTCACAATGTAGTGATAAGCCTAGTAATCCTTTTTCAATGGCAAATAACATGCCTCAAGAAATTAACAGCTCTGGTGGAGCAGTTCATATCCAGGGTAACCGCCAGAAATGTGAGGGAAGAGATACATCTCTTGATCTGCAAGAACAAGGTGTCCCTTTTGATGTTCCTAAGTCTTCTGTAAATGAATCAGAACCATATGACCTCGAGCTCAATGCTATCAGACATGATATCTCACTTCTGCAAGAGTCAATAACTAGTGTTGGATCACAGCTGCTAAAGCTTTCTGTTCGTCAGGAATTTTTGGGAATTGATTCACTTGGTCGCTTTTACTGGGCTTCAGCAATGCCTGGAGGATGTCCGTGTATACTTGCTGATTCAACTGCTCTGATGTTGCACGTGGGAAGAAAGGCCAATAGCAGAGACCCTGTGGACAATATTTGTGCTATGAAGAATTGTGGATTATCTGGCAAGGATAGCTATCAGATGTTAGGGCTGATGAAAGATTTATCTCCTTTAACGTCTCTATCAAGTAATACTTTAGGCTGCAATTCACCATGGGTTGCTTATCAAACTGATTCTGAAATTGAAGAGCTCTTATGTTGGCTGAAGGATATTGACCCTATAGAAAGAGAACTTAAAGATTCAATTATGATTTGGCATAAGTCAAGATTCCAAGAGCTTATTCATGTGCAGAATGAAGATCAGGTTGAGCCCCAAGGACCTTGTCCTTTACCTGGGGATAGAGAGAAAATAGTGTCTGATTCTCTTGTTACAAAGGCAACCTCCTTGTTAGAGAAGAAATATGGCCCATTCTTAGAGTTGGGTACCCTTGAGGCGTTGAAGAAGAGGGGTAAAAAGGTAAGAACATCTAATGATGATAATTTGTATAGGTGTCAATGCCTAGAACCCATATGGCCTTCTAGGCAACACTGCATGTCTTGTCACAAAACCCTTTTGAATGATGTTGAACTGGAGGGACACAATGATGGCAAATGTAGTGCTGCTTTGCCTGCCTCAGAGAAGAATAAAGTTGTTGGTGGATCTTCTAAAGGGAGAGGTAATTTGAAATTTGAGACCACCAACGAGAAAGTAAGAGGTAATGCAGAAACAGGTGGAACCTCAACGAGTGGAGGTTCTGAGCTTAGCTCAAGATTGATTAAGTTTTCAAATCAAGAATCAACATGTCCATATAACTTTGAAGATGTCTGTTCCAAGTTTGTGACTGAAGACTCCAACGAGGAACTTACTAAAGAAATAGGTCTTATTGATTCTGATGGGATCCCATCCTTTGTTCTTTCTGTATCTCCTTATGTAAGTGATTCTACAGTTATGCTAATATCAAACAAAAAGGCTGAATATGTTGCTGGTGGGTCTAAGGCTTCTGAAGGGCAGATTCCTAAAGGAAGTGGCATGTACCATGACCATATATCGGGAATTCCTATTCGAAGTTCCAGTGTTTATGAAAACAATAAAGCAGGAAAATCCAGTAGATCAACTTTGGGATCTTCAGGGCAAAGGGATGGAAAATCTTTATTTTCTGTTCCTGCTTCACAAGTGGGCACTGACAGCTGCTGTGTGGTACCTCAATCTTCATTGAGACCATTGGTTGGAAAAGTTTCGCATATTTTGAGGCTACTGAAGATTGGCCTACTTGATATGGATGCTGTGCTCCCTGAAGTTGCTTTGAGGACATCAAAAGCACTGTTGGAAAGAAGACAGGCTTGGCGTTCATTTGTTAAATCTGCGAGGACCATATATGAGATGGTTCAGGCGACAATCACACTGGAGGACATGATTAAGACAGAGTACTTAAGAAATGACTGGTGGTACTGGTCATCACTCTCAGCCGCTGCCAAATCTTCTACTTTGTCATCCCTTGCCCTTCGAATATACACCCTTGATTCAGCCATTATATATGAGAAAATGTCAAGTTCAAGTTTTACTGATTGCTCAGAACCTTCTGTGGTAGCAGAACAGAAAGCACTAGCCACTTTGGATACGGAGAAATCCAAAGCAATACGGAAGTCAAGCAGGAAAAGGAAGGAACCAGATGGTTAA 6684 0.4298 MMELTDSGDELRDRKLPQDSRSGLGIDLNEIPSPSFAETLPDSIDIVRAYHENPAPPPGGPAGIPGDVRGSTCGACGKPEARGHVVVCDGCERGYHLGCAGMRGRQAVNLDEWVCGECVSSGVKSKRWPLGVKSKHLLDINASPPSDADGEGSEELQDLRKHAQGHNSFSANSFGAPLTYSNCYNGNAIGFQRASGVVTHALRVGFEDVLNRMQSVSRNFEEVDMGLPPGRHRNSKNTATGNPGEIILQALRDFISERHGVLEEGWKVEFRQPMSSSELHFVYRAPDGKIFDSVFEVACYLGLMPGYNSLESETRNDRPVSSVGGSHFTRKRKSTRLPVANGFAERRESFTNSCFKDPPSDAASAKCANACGNISEATLSGRREDDHSSPQQSADGLPLQFEDFFVLSLGKVDDRPSYCDANIIWPVGYKSCWHDKITGSIFTCEVLDGGDSGPIFRVRRCSCSDFSIPVGSTILSMSNLCQFVSQSNEGDAKMNECMECDVDESIQMILDDSCNPTENDVLSCLESCSSEAHDSHTLDVLQSAAGPGQDETHNLSDDLGSIGEMVVEDCSSSSAWKDISQKLVNACSEICKQKGTLKLYCKHAESETCVHKWDIWNGKNETHPTSFAKFCGSPARGIPDMVHADDLESLYGALRKWLEQDRFGLDVEFVQEVLELLPGVEAFSQYEFLNTRSNGSSLLTVGSGFLVADWRDRSQYQEEAEQGLYRRHKKVKLAKECVKEDHCPPPGKPLSSRVPFELVGDVFQAWELLRRFHEILGLKEPLSLDEMEKELINPWYNGSVFSEKLEGDGSGGPMLSPDCEAAPSISAESPHAFIQVETEAMKEAAQVKLASFTYTRCFGASLTKAHNSLLEVLIGELQSKVAALVDPNFDPGELRTRRGRRKDIDSTVPARRAKLNMLPINELTWPELARRYILAVLSMDGNLDSPEITARESGKVFRCLQGDGGLLCGSLTGVAGMEADALLLAEATKKIFGSVSSESDVLTFEDEELDAKDAFEKTSLNDGNIPEWAQLLEPVRKLPTNVGTRIRKCVNDALLKDPPEWARKILQHSISKEVYKGNASGPTKKAVLSVLANVCGEGSQLKPNKTRRKKTVISISDIIMKQCRIVLRRAAAADDSKVFCNLLGRKLINSSDNDDEGLLGSPAMVSRPLDFRTIDLRLAAGAYGGFHEAFLEDVHELWNNVHIAFGDQPDLVELAEKLSENFEELYDSEVLTYVQRFGEYAKLGNLSVEKRKEVENFLASASEIPKAPWDEGVCKVCGIDRDDDSVLLCDTCDAEYHTYCLNPPLARIPEGNWYCPSCVDSKHAVQDVLQGSKPIGKPRSTKFKGEVTSLYLEALSHLLSVMEEKEYWEYSVGERTILLKFLCDELLNTSLIRQHLEQCAESSAESHQKLRALSAEWKSLKIREEILSSKAAKIDTCSVASTGEVLKEGLPVSVSNPGKCLVQPHSASDSPNNFGVFSDSLYLEEINKEKNGFNSVDKSVSTTNSETDSQSRNITNVEGQLKNVCTAVDGSQLPISMTSCVDSQCSDKPSNPFSMANNMPQEINSSGGAVHIQGNRQKCEGRDTSLDLQEQGVPFDVPKSSVNESEPYDLELNAIRHDISLLQESITSVGSQLLKLSVRQEFLGIDSLGRFYWASAMPGGCPCILADSTALMLHVGRKANSRDPVDNICAMKNCGLSGKDSYQMLGLMKDLSPLTSLSSNTLGCNSPWVAYQTDSEIEELLCWLKDIDPIERELKDSIMIWHKSRFQELIHVQNEDQVEPQGPCPLPGDREKIVSDSLVTKATSLLEKKYGPFLELGTLEALKKRGKKVRTSNDDNLYRCQCLEPIWPSRQHCMSCHKTLLNDVELEGHNDGKCSAALPASEKNKVVGGSSKGRGNLKFETTNEKVRGNAETGGTSTSGGSELSSRLIKFSNQESTCPYNFEDVCSKFVTEDSNEELTKEIGLIDSDGIPSFVLSVSPYVSDSTVMLISNKKAEYVAGGSKASEGQIPKGSGMYHDHISGIPIRSSSVYENNKAGKSSRSTLGSSGQRDGKSLFSVPASQVGTDSCCVVPQSSLRPLVGKVSHILRLLKIGLLDMDAVLPEVALRTSKALLERRQAWRSFVKSARTIYEMVQATITLEDMIKTEYLRNDWWYWSSLSAAAKSSTLSSLALRIYTLDSAIIYEKMSSSSFTDCSEPSVVAEQKALATLDTEKSKAIRKSSRKRKEPDG 2227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1328 2227 ProSitePatterns Zinc finger PHD-type signature. 73 118 IPR019786 -
Lele16g1328 2227 CDD Bromodomain 1119 1226 - -
Lele16g1328 2227 ProSiteProfiles Zinc finger PHD-type profile. 70 121 IPR019787 -
Lele16g1328 2227 SUPERFAMILY DNA-binding domain 254 307 IPR016177 GO:0003677
Lele16g1328 2227 SUPERFAMILY Bromodomain 1108 1227 IPR036427 GO:0005515
Lele16g1328 2227 MobiDBLite consensus disorder prediction 1 20 - -
Lele16g1328 2227 PANTHER OS02G0192300 PROTEIN 15 2223 - -
Lele16g1328 2227 MobiDBLite consensus disorder prediction 1906 1922 - -
Lele16g1328 2227 CDD PHD1_Lid2p_like 1273 1318 - -
Lele16g1328 2227 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 252 319 IPR001739 GO:0003677
Lele16g1328 2227 SUPERFAMILY FYVE/PHD zinc finger 1260 1323 IPR011011 -
Lele16g1328 2227 ProSiteProfiles FYR domain FYRN motif profile. 396 449 IPR003888 GO:0005634
Lele16g1328 2227 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1229 1331 IPR013083 -
Lele16g1328 2227 SMART PHD_3 72 119 IPR001965 -
Lele16g1328 2227 SMART PHD_3 1273 1319 IPR001965 -
Lele16g1328 2227 ProSiteProfiles Bromodomain profile. 1164 1212 IPR001487 GO:0005515
Lele16g1328 2227 SUPERFAMILY FYVE/PHD zinc finger 71 130 IPR011011 -
Lele16g1328 2227 MobiDBLite consensus disorder prediction 1 33 - -
Lele16g1328 2227 ProSiteProfiles Zinc finger PHD-type profile. 1271 1321 IPR019787 -
Lele16g1328 2227 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 66 138 IPR013083 -
Lele16g1328 2227 MobiDBLite consensus disorder prediction 1885 1922 - -
Lele16g1328 2227 ProSitePatterns Zinc finger PHD-type signature. 1274 1318 IPR019786 -
Lele16g1328 2227 Pfam Bromodomain 1162 1217 IPR001487 GO:0005515
Lele16g1328 2227 Pfam Methyl-CpG binding domain 253 305 IPR001739 GO:0003677
Lele16g1328 2227 MobiDBLite consensus disorder prediction 223 242 - -
Lele16g1328 2227 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 1353 1397 IPR028942 -
Lele16g1328 2227 Pfam PHD-finger 1273 1319 IPR019787 -
Lele16g1328 2227 Pfam PHD-finger 73 120 IPR019787 -
Lele16g1328 2227 Gene3D - 1101 1228 IPR036427 GO:0005515
Lele16g1328 2227 CDD PHD_SF 72 118 - -
Lele16g1328 2227 Gene3D - 397 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1328 Lele-ChrLele16 7561854 7572813 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1328 2 2227 C2H2 Transcription Factor Family AT3G01460 45.088 0.0 1737
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Lele16g1328 Bromodomain 0.00014 No_clan