Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1317 ATGCCTCAACGACCAAAAAGGATGATACATTTTAGCAAACTATATTCATTTTCGTGCATAAAATCCGCCTTCAGACATGATCAGTCTCAAATTGGGCAGAGAGGCTACTCAAGGGTGGTATATTGCAATGATCCTGACAACCCAGAAGCTGTTCCGTTGAATTACATAGGAAACTATGTTTCAACGACCAAGTATACGGCTTTTAATTTTATTCCCAAGTCTTTATTTGAGCAGTTTAGGAGGGTTGCAAATATCTACTTTCTTATTGTCGCGTGTCTTTCGTTTAGTCCATTGGCACCTTTCACACCTTTGAGTATTGTTGTACCGTTGCTTGTGATGATGGGAGTTACTATGGCCAAGGAAGCTGTGGAAGATTGTAGGAGAAGAAAACAGGTTATGTTTGAGTATGTTTGAGTTTCTGGAAATGATGATAACAATTTACAGACAATACTTGTCGGGTCACACATGGATATTGAAGCAAACAACAAAAAGGTTAATGTATTCAGTGGAAATACATTTGTGGAGACCAGATCGAAGAAACTCCGGGTGGGTGATCTCATCAAAGTGTGTAAGGATGAATACTTCCCTGCTGATCTTCTTCTGCTTTCATCGAGTTATGAGGATGGGGTTTGCTATGTTGAGACAATGAATCTTGATGGGGAAACCAATCTAAAACTAAAGCATGCTTTGGAAGCCACAGCTCATATTCATGATGAAAAATCCCTTGAAAAGTTTGGGGCAGTGGTCAAATGTGAGGATCCTAATGAAAATCTGTACTCATTTGTTGGAACATTGTACTATGAAGACAAAGAATATCCGCTTTACTTGCAACAGATTCTTTTAAGAGACTCCAAGCTGAAAAACACTGAATATGTTTATGCTGTCGTTATCTTTTCTGGCCATGATACAAAAGTGATGCAGAATGCCACTGACCCACCATCCAAGAGAAGCAAAATTGAGAGAAAAATGGATAAAATAATCTACATCCTCTTTAGTACCTTGGTCTTGATATCTTTTATTGGCTCTGTCTATTTTGGCATTGAGACAAAAAGGGATCTTAATGACAGCAAGTACACAAGATGGTATCTTCGTCCGGACAATACAGCAGTGTTTTATGATCCTAGAAGGGCAATACTTGCTGCCATTCTTCATTTTCTAACTGCCCTTATGTTGTATGGATATCTAATTCCCATCTCACTATATGTATCCATTGAAATGGTGAAAGTCTTGCAGAGTGTTTTCATCAACCATGATCAGGAAATATATTATGAAGAAGCTGATAGGCCAGCTCATGCATGCACATCTAATTTAAATGAGGAACTCGGGCAGGTTGATACTATATTGTCCGACAAAACAGGTACTTTGACGTGTAACTCTATGGAGTTTGTGAAATGTTCCATAGCGGGTACTCCATATGGTTGTGGTATGACAGAAGTGGAGAGAGCACTTGCACGGAGGGGGAGAAATAAGGAACCAGAAGCCGAGGGTTTATCATCTGATTTACAGGGCCAGATCAATGATGCTGTGGACTCCAGGCAGACAGTTAAGGGTTTCAACTGTAGAGATGAACGTATAATGAATGGGAAATGGGTTAATGAACCTCATCCAGACATCATACAGAAATTCTTTAGAGTTTTAGCAATCTGTCATACAGCTATTCCTGATGTAGATGAACAATCCGGAGAAATTTCCTATGAAGCTGAGTCTCCAGATGAAGCAGCTTTTGTCATAACTGCAAGGGAACTTGGTTTCGAGTTTTTTGAAAGGACACAAACAAGCATATCGTTGCATGAATTGGACTATGACAGCGGAGAAAAGGTTGACAGAGTGTACGAGCTTCTGCATGTCTTAGAGTTCAGCAGTTCCCGTAAAAGAATGTCGGTGATAGTAAGGAATGAAGAAGATCAACTGTTGCTCCTATGCAAGGGAGCAGACAGTGTTATGCTTGAAAGGCTCTCCCAAGATGGAAGAAAATTCGAGGCTGAGACTGTAGATCACATCAAAAGATATTCCGAGGCAGGTTTAAGAACTCTGGTTCCTGAATGTATTAATAAGCTCGCCCAGGCAGGAATAAAATTATGGGTATTGACTGGGGACAAGATGGAAACTGCAGTCAACATAGGTTTACTTAGTCAAGACATGAAACAGATAGTGATAACTCTGGATTCACCAGATATCGTATCCTTAGAAAAACAAGGGGACAAGGAGGCTCTTGCAAAGGCCTCTCTTGAAAGCATTAAGAAGCAAATCAGAGAGGGGATTTCACAAATCAAGTCTGCGAAAGAGAGTTCTAAAGAAACTACTACTGAATTAGGCTTGATAATTGATGGGAAGTCCTTGGATTATTCTCTTAACAAGAATGTCGAGAAGTCGTTTTTCTATCTAGCCGTTAATTGTGCTTCTGTTACAAGATTGGTGAAATTGGGAACTGGGAAGACAACACTGTCAATTGGTGATGGTGCAAACGATGTTGGCATGCTTCAGGAGGCTGATATAGGAGTTGGTATTAGCGGTGCTGAAGGGATGCAGGCTGTGATGGCAAGCGATTTTGCAGTAGCTCAGTTTCGATTTCTTGAGCGTTTGTTGTTGGTACACGGCCACTGGTGTTATAGACGAATTACGATGATGGTAATACATGCTCGTGCTGAAAATGATCATATTCTTTTCAGTCAGTTATTTTTGCAAGAATCATTACATGCTTATATGCTATTTTTCTATAAGAACATCGCATTCGGATTTACTCTATTTTGGTTCGAGGCGCATGCTTCTTTCTCTGGACAACCTGGATACAATGATTGGTACATGTCATTTTACAATGTCTTCTTCACTTCACTTCCTGTAATTGCTCTGGGTGTTTTTGATCAGGATGTTTCTGCCCGACTTTGCCTCAAGGCCTTCAGAAGTGATGGTCATGGGGTTGATTGGGAAATACTTGGAGTCACAATGTACACTTGTGTGGTGTGGACTGTGAATTGTCAAATGGCACTATCTATTAACTACTTCACTTGGATTCAACATTTTTTCATATGGGGAAGCATTGTCTTCTGGTATGTGTTCTTGCTGATTTATGGCTATCTCCCCCCAGCCATATCCGGAACAGCTTACAAGATTCTTGTGGAAGCCTGTGCTCCCAGTGGTCTCTATTGGCTCGTTATGCTTTTCGTCGTCGTGTGCACTCTTCTTCCCTATTTCTCGTATCGGTCTTTCCAGACTCGGTATTTACCAATGTACCATGATATTATTCAGAAAAAACAAGGGGAAGGGTCTGAAACCGAGACATCGAAAGATCTGCCAAGAAGGGTTGAGGGCAAGCTAAGCCATCTCGGAGAAAGATTGAAGGAAAGGGACTTGTAA 3354 0.4073 MPQRPKRMIHFSKLYSFSCIKSAFRHDQSQIGQRGYSRVVYCNDPDNPEAVPLNYIGNYVSTTKYTAFNFIPKSLFEQFRRVANIYFLIVACLSFSPLAPFTPLSIVVPLLVMMGVTMAKEAVEDCRRRKQVMFEYVXVSGNDDNNLQTILVGSHMDIEANNKKVNVFSGNTFVETRSKKLRVGDLIKVCKDEYFPADLLLLSSSYEDGVCYVETMNLDGETNLKLKHALEATAHIHDEKSLEKFGAVVKCEDPNENLYSFVGTLYYEDKEYPLYLQQILLRDSKLKNTEYVYAVVIFSGHDTKVMQNATDPPSKRSKIERKMDKIIYILFSTLVLISFIGSVYFGIETKRDLNDSKYTRWYLRPDNTAVFYDPRRAILAAILHFLTALMLYGYLIPISLYVSIEMVKVLQSVFINHDQEIYYEEADRPAHACTSNLNEELGQVDTILSDKTGTLTCNSMEFVKCSIAGTPYGCGMTEVERALARRGRNKEPEAEGLSSDLQGQINDAVDSRQTVKGFNCRDERIMNGKWVNEPHPDIIQKFFRVLAICHTAIPDVDEQSGEISYEAESPDEAAFVITARELGFEFFERTQTSISLHELDYDSGEKVDRVYELLHVLEFSSSRKRMSVIVRNEEDQLLLLCKGADSVMLERLSQDGRKFEAETVDHIKRYSEAGLRTLVPECINKLAQAGIKLWVLTGDKMETAVNIGLLSQDMKQIVITLDSPDIVSLEKQGDKEALAKASLESIKKQIREGISQIKSAKESSKETTTELGLIIDGKSLDYSLNKNVEKSFFYLAVNCASVTRLVKLGTGKTTLSIGDGANDVGMLQEADIGVGISGAEGMQAVMASDFAVAQFRFLERLLLVHGHWCYRRITMMVIHARAENDHILFSQLFLQESLHAYMLFFYKNIAFGFTLFWFEAHASFSGQPGYNDWYMSFYNVFFTSLPVIALGVFDQDVSARLCLKAFRSDGHGVDWEILGVTMYTCVVWTVNCQMALSINYFTWIQHFFIWGSIVFWYVFLLIYGYLPPAISGTAYKILVEACAPSGLYWLVMLFVVVCTLLPYFSYRSFQTRYLPMYHDIIQKKQGEGSETETSKDLPRRVEGKLSHLGERLKERDL 1117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1317 1117 SUPERFAMILY HAD-like 436 862 IPR036412 -
Lele16g1317 1117 SUPERFAMILY Calcium ATPase, transduction domain A 162 309 IPR008250 -
Lele16g1317 1117 Gene3D - 123 310 - -
Lele16g1317 1117 Pfam Phospholipid-translocating P-type ATPase C-terminal 845 879 IPR032630 -
Lele16g1317 1117 Pfam Phospholipid-translocating P-type ATPase C-terminal 902 964 IPR032630 -
Lele16g1317 1117 Pfam Phospholipid-translocating P-type ATPase C-terminal 967 1075 IPR032630 -
Lele16g1317 1117 CDD P-type_ATPase_APLT_Dnf-like 57 964 - -
Lele16g1317 1117 Pfam Cation transport ATPase (P-type) 566 653 - -
Lele16g1317 1117 Gene3D - 502 675 IPR023299 GO:0000166
Lele16g1317 1117 Pfam Phospholipid-translocating ATPase N-terminal 40 105 IPR032631 -
Lele16g1317 1117 Pfam E1-E2 ATPase 161 360 - -
Lele16g1317 1117 MobiDBLite consensus disorder prediction 1085 1117 - -
Lele16g1317 1117 Gene3D - 676 857 IPR023214 -
Lele16g1317 1117 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 525 678 IPR023299 GO:0000166
Lele16g1317 1117 SUPERFAMILY Calcium ATPase, transmembrane domain M 55 1075 IPR023298 -
Lele16g1317 1117 ProSitePatterns E1-E2 ATPases phosphorylation site. 450 456 IPR018303 -
Lele16g1317 1117 PRINTS P-type cation-transporting ATPase superfamily signature 448 462 - -
Lele16g1317 1117 PRINTS P-type cation-transporting ATPase superfamily signature 817 836 - -
Lele16g1317 1117 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 965 1086 - -
Lele16g1317 1117 TIGRFAM ATPase-Plipid: phospholipid-translocating P-type ATPase, flippase 156 679 IPR006539 GO:0000287|GO:0005524|GO:0015914|GO:0016020|GO:0140326
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1317 Lele-ChrLele16 7496453 7502116 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1317 2 1088 Primary Pumps ATPases AT3G25610 54.208 0.0 1278