LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele16g1316	ATGCTCTTAACCCTCTCATCATTTAAGATTATTGATCGAACGGTTAGACACCTGTTGAATAGAACGGTTTGTGATCTCAACTTATGCCCAAAAAGAATGGAGCATGTATCAGAAGAAAGATTTCCTCTCAATGCTAAAGATTATAAGCTGTATGAAGAAGTTGGCGAAGGAGTTAGTGCCACTGTGTACCGAGCTCTTTGTATTCCACTCAACAAGGAAGTTGCAATCAAGGTTCTTGATTTAGAAAAGTGCAATAATGATCTGGATGGCATCAGGAGAGAGGTACAGACAATGACCTTGACAAATCATCCAAATGTTGTACGCTCACACTGCTCTTTCACTACTGGACACAATCTTTGGGTGGTGATGACATACATGTCTGGGGGATCATGCCTTCATATAATGAAATCTTCCCATCCTGAGGGTTTTGAAGAGCCTGTCATTGCTACTTTGCTGCGAGAGGTTCTCAAAGCTCTTGTCTACCTTCATGCCCATGGGCACATACATAGAGATGTTAAGGCTGGCAATATTTTGATTGATTCTAAAGGTGCTGTCAGATTAGCTGACTTTGGGGTGTCAGCATGTATGCTTGATACTGGAGATAGGCAACGTTCAAGAAACACTTTTGTTGGAACTCCTTGCTGGATGGCTCCTGAAGTTATGCAGCAATTACATGGATATGATTTTAAAGCAGACATATGGTCATTTGGTATAACGGCTCTTGAACTTGCTCATGGCCATGCCCCATTTTCCAAATATCCTCCAATGAAAGTTTTGCTTATGACTTTACAAAATGCCCCTCCTGGCCTTGATTATGAAAGAGACAAGAGATTTTCAAAGTCTTTCAAAGAGATGGTTGCCACTTGCCTAGTGAAGGACCCAAAGAAACGTCCAAGTTCAGAAAAGCTTTTAAAGCATCACTTCTTTAAACATGGTCGCTCCAGTGAATATCTATCTCAGACCATCTTGGACGGCCTTGCTCCATTAGGAGATCGTTTTAGGATGCTGAAGGCCAAAGAAGCAGATTTATTGGTGCAGAACAAGGCTCTTTATGAGGATAAGGATCAATTATCACAGAAAGAATATATACGGGGAATTAGTGCTTGGAATTTCAACCTTGAGGATTTAAAAAGTCAAGCTGCCCTAATTCAAGATGATGGCATGCCAAATGCAGAAGAACCAGATACTGCAGAGCGGCCTTCATCTGTAGCTGCTAATTATTCAGATACTGCACTCATGCTGGGCAAGGAGGATGGGTTCAATGATGCTCAAGATTTGGAGAGTTCACTTGCTTCATTTCCTATTAAACCTCTTCAAGCACTTGAAGGTTCTCTCTATGTATGTGAGAACAGTGTCAATAATGCTGCTTTGGGAGATTCAGATCGGGATGATGGAAGAAATGAGAATGACATTTCTGGGACAAGCAGTTCATTGTTACAAAATGATTTAGCTGAGCATATAAAGTTGGGTGGTTATCTGCTGCCTGATGGTTCTTTTTCTACTAAAAAATTTATTGCTGACGATGCATCAGAAGCATTTATCCAGTGTAAGGGGCGATTCAAGGTCACATCAGCAGATCTCAGCCCTAAGGGTCCTCTGAACTGCAATTTTGGTCCTGTTTGTGGAGGTCATTCCAGTCCACCGGAACAGAACCTTACATCTGCCTCTATTCTTGCATCACTGCATTGCATTTTGCAGCAGAACATTATGCAAAGGGAAGAAACTATTAAATTAATAAAGTACGCAGGGCAATCTTGCGGTAGGAATATAGAACCTGTGGAGGCAGGGGTCGTTGATCTTTCGCAGATATCACCTAGAACAACTAGGGAGAGAGAGTTGCATTCTCAGTTGATCCAACTCCAACAGAGCATCGAGAGCCTTGTTGAGGAATTGCAAAGGCAAAAGACGAAAAACTCCCAGTTAGAAAAACAGCTGAACTTTGCGAGCGACGGAGTGGAAAGGTGA	1965	0.4198	MLLTLSSFKIIDRTVRHLLNRTVCDLNLCPKRMEHVSEERFPLNAKDYKLYEEVGEGVSATVYRALCIPLNKEVAIKVLDLEKCNNDLDGIRREVQTMTLTNHPNVVRSHCSFTTGHNLWVVMTYMSGGSCLHIMKSSHPEGFEEPVIATLLREVLKALVYLHAHGHIHRDVKAGNILIDSKGAVRLADFGVSACMLDTGDRQRSRNTFVGTPCWMAPEVMQQLHGYDFKADIWSFGITALELAHGHAPFSKYPPMKVLLMTLQNAPPGLDYERDKRFSKSFKEMVATCLVKDPKKRPSSEKLLKHHFFKHGRSSEYLSQTILDGLAPLGDRFRMLKAKEADLLVQNKALYEDKDQLSQKEYIRGISAWNFNLEDLKSQAALIQDDGMPNAEEPDTAERPSSVAANYSDTALMLGKEDGFNDAQDLESSLASFPIKPLQALEGSLYVCENSVNNAALGDSDRDDGRNENDISGTSSSLLQNDLAEHIKLGGYLLPDGSFSTKKFIADDASEAFIQCKGRFKVTSADLSPKGPLNCNFGPVCGGHSSPPEQNLTSASILASLHCILQQNIMQREETIKLIKYAGQSCGRNIEPVEAGVVDLSQISPRTTRERELHSQLIQLQQSIESLVEELQRQKTKNSQLEKQLNFASDGVER	654

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele16g1316	654	FunFam	Serine/threonine-protein kinase BLUS1	37	125	-	-
	Lele16g1316	654	ProSitePatterns	Protein kinases ATP-binding region signature.	54	77	IPR017441	GO:0005524
	Lele16g1316	654	SUPERFAMILY	Protein kinase-like (PK-like)	45	332	IPR011009	-
	Lele16g1316	654	MobiDBLite	consensus disorder prediction	456	475	-	-
	Lele16g1316	654	Pfam	Protein kinase domain	48	309	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele16g1316	654	PANTHER	SERINE/THREONINE-PROTEIN KINASE FRAY2	38	636	-	-
	Lele16g1316	654	CDD	STKc_OSR1_SPAK	46	309	-	-
	Lele16g1316	654	Gene3D	Transferase(Phosphotransferase) domain 1	129	342	-	-
	Lele16g1316	654	SMART	serkin_6	48	309	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele16g1316	654	ProSiteProfiles	Protein kinase domain profile.	48	309	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele16g1316	654	Coils	Coil	610	651	-	-
	Lele16g1316	654	Gene3D	Phosphorylase Kinase; domain 1	36	124	-	-
	Lele16g1316	654	FunFam	serine/threonine-protein kinase BLUS1 isoform X1	129	362	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele16g1316	Lele-ChrLele16	7485187	7491508	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele16g1316	33	646	MAP Kinase Kinase Kinase Kinase	AT5G14720	64.179	0.0	844

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	STE_STE20-Fray	Lele16g1316		Pkinase	6.4e-60	CL0016