Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1313 ATGGCGTCATCATCAAGCTACAACTCTCCATGTGCAGCGTGCAAGTTTCTGAGAAGGAAGTGCATGCCGGACTGCATATTTGCGCCATATTTCCCACCAGAAGAGCCTCAAAAATTTGCCAACGTTCATAAGATATTCGGAGCAAGCAACGTGAGCAAGCTTCTGAACGAAGTGTTGCCTCATCAAAGAGAAGATGCAGTGAACTCTCTGGCTTATGAAGCTGAGGCAAGGATCAAAGATCCAGTCTATGGCTGTGTTGGAGCAATTTCTGTGCTCCAGAGGCAAGTCATAAGGCTCCAGAAGGAACTAGACGCCACAAATGCTGAAATGATTCGCTACACTTGCACTGAAATTCCCACTGATGCAACTAGATTATTGGGCACTGAAGGACCTGGAGGTTCGTCGTCTTCTCTTCTTGCTCAATCTCCTTCTGCTTTTTACTATCCTGCTCCTTGGAATAATGATCTTTGTGGGGATGGCTTTCATCACATTCACAGAGGAGGAGGAGCAGATAACAATAACATGTGA 528 0.4583 MASSSSYNSPCAACKFLRRKCMPDCIFAPYFPPEEPQKFANVHKIFGASNVSKLLNEVLPHQREDAVNSLAYEAEARIKDPVYGCVGAISVLQRQVIRLQKELDATNAEMIRYTCTEIPTDATRLLGTEGPGGSSSSLLAQSPSAFYYPAPWNNDLCGDGFHHIHRGGGADNNNM 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1313 175 Pfam Lateral organ boundaries (LOB) domain 10 106 IPR004883 -
Lele16g1313 175 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
Lele16g1313 175 Coils Coil 89 109 - -
Lele16g1313 175 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 8 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1313 Lele-ChrLele16 7463748 7464275 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1313 1 113 AS2 family AT5G63090 87.719 6.33e-70 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele16g1313 LOB 4.6e-42 No_clan