Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1264 ATGAATTGCTGCAAGCTGCTGCTCATAAATTTGCTTCTTGAGGAGGATTTTCTCAGATCCAAAACTTCTGCTAACATCGATGTTCACCTTCATGAAATTGTGTGCCTAGTGCTCCAGACTGGTTCAATGAGACATTTTCAACTTCTTCTGGTTCTTTTCTTGTTTTTGTCTATCCAAAGCAGCCTTGGACTTCAGGCTGCTCAAACACGAGTCCTGTTACAGTTAAGGAAGTATCTGGAGAACCCTACCTCGTTGGAAGTTTGGGAAAATTATTACGGAGACTTCTGTAACATATCTCCATCTGCACGTATGAGCATTAAATGTGAGGACAATTCTGTAACAGAGCTTAAAATCATGGGAGATAAACCCGTGAAGGTCAAAGAATTCAATGGGCTAGCAATTCCTAATCAAACATTGGGTGAGAGTTTTTCTATTGATTCTTTTGTCACCACATTGGTCAGGTTAACCAGCTTGAGGGTTCTTAGCTTGGTGTCACTGGGGATTTGGGGGCCACTCCCTGATAAGATTCATCGATTATCTTTACTTGAAATTCTGGACTTGAGCTCAAATTTCTTATACGGTACAATCCCACCAAAAATATCTACAATGGTAAAGCTTCATGCACTAACCATTAATGCCAATTATTTCAATAGCACCATCCCGGATTGGCTTGATTCATTATCTAATCTACAAGCTCTGAGTTTGAACAGCAACCGCTTGAAGGGTTCATTCCCCTCTTCACTTTGCAAAATTAAAACGCTCACTGACATTTCCTTGTCTTACAATGAATTGTCTGGTAAATTGCCTGATCTGAGTACTCTCACTGGCTTACATGTGCTGAATTTAGGAGATAATGATCTAGACTCTGAACTACCATTGATGCCCAAATCAGTAGTTACAGTTCTCCTAAATAAAAATTCATTTTCGGGCAAGATACCCAAGCAGTTTGGTGAACTGGTTCAGCTTCAACATCTAGACCTCTCATCAAATCATCTCATTGGGATTCCCCCATCCCCATTGTTCTCTTTGCCTAACATCAGATTCATGAATTTGGCAAGCAATACTCTGAGCGGGTCCCTTCCAAATAAACTAACCTGTGGAAGCAAACTTGGGTATGTGGATATTTCTAGTAACAAGCTAATTGGTGGACTTCCTTCTTGCTTGGCAAGCACGTCTGAGAGAAGAGTCGTGAAATATGGTGGGAATTGCTTAACTGTTGATTCTCAAGAATCTCAACATCAGACGAAAGGGTCTTACTGTAAACAGACTAGTGTGAAGAAGTTCCAGGCACTGAAAATAGTTGTAGCTTTGGCCATTATTACTGGACTAGCCCTCATTCTTGTGCTTTTTGTGTTTGGTGTTTACTTTTGTCGCAAGAGATGCCATCTGAGAAAAACATCTGGGCAGCATGCGTTGCCAAAACGAGTAAGAGATAATTCTGCAGCAGGGGTTTCCTCTGAACTCCTTGCAAGTGCCAGATTCATTTCTCAGGCAGTGAAGCTTGGAGCACAGGCTAATCCAGTCTGTCGAGTGTTTTCAATTGAAGAGCTGAAGGAAGCCACGGAAGATTTTCATGTGTCAACTTATATGGGTGAAGGATCCATAGGGAAGTTGTACAAAGGTAAACTAGAAAATGGACCCTATGTAGCAATACGATCTTTGTCTCTCTCAAAGAGATGCTCAATTCAAAATCTTAAAGGTCGGCTGGACTTACTCTCAAAGCTTCACCACCCTAATTTGGTTAGCCTCTTGGGTCATTGTATAGATGGTGGTGGACAACATCATTCCAGTACTCTCAAACTTCATCTTGTATATGATTATATACCAAATGGCAATTATCGTGCCCATCTGTCAGAATTTTCTCCAGAGAAGGCGCTCAAGTGGTCTGATAGATTGGCAATTTTAATTGGAGTTGCCAAGGCAGTGCATTTCTTACACACTGGGGTTATACCTGGCTGTTTTAGAAACCAATTAAAGACAAACAATATTTTGCTTGATGAGCATCACATTCCCAAACTAAGTGATTATGGGATGTCCCTCATCAGAGAAGAGGTTGAAAAACTAGAGGCTAACGGAGAGAGCCCAATATCATGCCAAAAGACGTCAATGGAGGATGATGTTTATAATTTTGGATTCATATTGTTTGAATCCCTTGTTGGAACCATAGCAAGTGAGAAAGGAGAAGAATATTTCCTGACTGAAAAGGCATCTTTTGGTAGTCAAGATGGTCGAAGAAAGATAGTGGATCCGATAGTGTTGACCACATGCTCTCAAGAGTCATTATCAATTGCAGTATCTATAACAACCAAATGCATATCCCCAGAACCATCATGCCGTCCCTCTTTTGAAGATGTTCTTTGGAACTTACAATACGCAGCTCAAGTCCAGGCCACTGCAGATGCAGATCAGAAATCAGATTCTACATGA 2427 0.4096 MNCCKLLLINLLLEEDFLRSKTSANIDVHLHEIVCLVLQTGSMRHFQLLLVLFLFLSIQSSLGLQAAQTRVLLQLRKYLENPTSLEVWENYYGDFCNISPSARMSIKCEDNSVTELKIMGDKPVKVKEFNGLAIPNQTLGESFSIDSFVTTLVRLTSLRVLSLVSLGIWGPLPDKIHRLSLLEILDLSSNFLYGTIPPKISTMVKLHALTINANYFNSTIPDWLDSLSNLQALSLNSNRLKGSFPSSLCKIKTLTDISLSYNELSGKLPDLSTLTGLHVLNLGDNDLDSELPLMPKSVVTVLLNKNSFSGKIPKQFGELVQLQHLDLSSNHLIGIPPSPLFSLPNIRFMNLASNTLSGSLPNKLTCGSKLGYVDISSNKLIGGLPSCLASTSERRVVKYGGNCLTVDSQESQHQTKGSYCKQTSVKKFQALKIVVALAIITGLALILVLFVFGVYFCRKRCHLRKTSGQHALPKRVRDNSAAGVSSELLASARFISQAVKLGAQANPVCRVFSIEELKEATEDFHVSTYMGEGSIGKLYKGKLENGPYVAIRSLSLSKRCSIQNLKGRLDLLSKLHHPNLVSLLGHCIDGGGQHHSSTLKLHLVYDYIPNGNYRAHLSEFSPEKALKWSDRLAILIGVAKAVHFLHTGVIPGCFRNQLKTNNILLDEHHIPKLSDYGMSLIREEVEKLEANGESPISCQKTSMEDDVYNFGFILFESLVGTIASEKGEEYFLTEKASFGSQDGRRKIVDPIVLTTCSQESLSIAVSITTKCISPEPSCRPSFEDVLWNLQYAAQVQATADADQKSDST 808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1264 808 Pfam Protein tyrosine and serine/threonine kinase 526 787 IPR001245 GO:0004672|GO:0006468
Lele16g1264 808 SUPERFAMILY Protein kinase-like (PK-like) 507 789 IPR011009 -
Lele16g1264 808 ProSiteProfiles Leucine-rich repeat profile. 321 342 IPR001611 GO:0005515
Lele16g1264 808 Gene3D Ribonuclease Inhibitor 65 296 IPR032675 -
Lele16g1264 808 SMART LRR_typ_2 274 297 IPR003591 -
Lele16g1264 808 SMART LRR_typ_2 227 251 IPR003591 -
Lele16g1264 808 SMART LRR_typ_2 179 203 IPR003591 -
Lele16g1264 808 SMART LRR_typ_2 319 343 IPR003591 -
Lele16g1264 808 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 298 425 - -
Lele16g1264 808 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 608 808 - -
Lele16g1264 808 Pfam Leucine rich repeat 205 264 IPR001611 GO:0005515
Lele16g1264 808 Pfam Leucine rich repeat 321 380 IPR001611 GO:0005515
Lele16g1264 808 Gene3D Phosphorylase Kinase; domain 1 487 607 - -
Lele16g1264 808 Gene3D Transferase(Phosphotransferase) domain 1 608 808 - -
Lele16g1264 808 ProSiteProfiles Protein kinase domain profile. 524 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele16g1264 808 PANTHER UNNAMED PRODUCT 150 721 - -
Lele16g1264 808 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 487 607 - -
Lele16g1264 808 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 65 296 - -
Lele16g1264 808 Gene3D Ribonuclease Inhibitor 297 429 IPR032675 -
Lele16g1264 808 SUPERFAMILY L domain-like 152 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1264 Lele-ChrLele16 7157049 7160688 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1264 43 734 Miscellaneous Gene Families AT5G14210 58.000 0.0 777
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Lele16g1264 PK_Tyr_Ser-Thr 4.5e-20 CL0016