Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1263 ATGAAAATTCTATTCTCTGCCGTCAGCTCTGCTTTCCACTATTTTCCTCTTCTTTATTTTCGTTTCTGTATTGTCCGGACGTTTTCGATTCCTTCTGATGCACGAAGTTCAGTGAGATATGCTGTAGGACTCATTACTTCGGCGGCCATGGTTTCTGGCTTGAAAGCAAAGAGCAGGGGAAGTGCTAGTGTTAAAATTAATTACCTCATTCATATCGAGGAAATCAAACCTTGGCCCCCCTCACAGTCTCTAAGATCCGTTCGTTCTGTACTGATACAGTGGGAGAATGGAGAACGCTATTCAGGTTCTACCGGTCATGTTGTACCCTCGCTGGGTTCTGATACAGATGAAGGAAAAATCGAATTTAACGAGTCGTTCAGACTTCCTGTAACTCTGTTGAGGGATATGTCCATTAGAAGTGGAAATGCTGATGTATTCCAAAAGAATTGCTTGGAGTTCAACTTGTATGAGCCCCGAAGAGATAAGACTCTTAAGGGTCAGTCGCTGGGGACTGCCATCATAGACTTGGCAGATTATGGTATATTTAAGGAGACCTTGAGCATTAGTGCTCCGATGAACTGCAAGAGGAACTACAAAAACACGGGCCAGCCACTTCTATTCGTAAAAATTCAGCCTGTTGAAAAGAGTCGCACTAACTCCTTGTCAAGGGACAGTTTGTCAAAAGTTGCGCCAAAGGACGTTAATGGTGGTGACTCAACATTGAAGAATGAAGAATACATTGAAGAAGCAGGGATTGCCACTTTTTCTGATGATGATGTTTCTTCACATTCATCTGTGGCAGCTGTTGCTTCTGCACTAGGGGACAATAGGTGTATACCTGCTGAACTTGTAGAGAATGGATCAACTCAAAAGACTGATAGGGATGAGAAGGAGCGTCTGGCAAGGCTTGAAAAAACAAATATGATGCCACAAGATACATACCAAAAGCTGGAGAGGGGTTCATCAAGCACATCATCATTGGATATATCATCTGATCTCGGGAGTCCGGTAAATGGTCATGCTTCTTCTAATTCCACTAATTGTTATTCAGTGATCACTCAAAAACATGCTGTTACGCCAAATGCTTATTCTTCTTATCCATCTTTGGCTCATGACAAATTAGAGGCAGATTTCAAGATCAAGACTAGAAATAGTGGTAGTAAACATTCAGATGAGGAGGTTCATGAAAAGGTTGTTAATCATAGAAATACAGTTACAGATGTTCAAATGTACAGCAAGAATCAAGGTGCTGTAAATTGTGACGTTTCTGAAGTCATTGATAAATTCGACGGGATATATGAGGAAGGTGACAAATATTGTGTGAAGGAGGAAGGAGGTGGTAAATTTTACAATAGTTATGTTGAGGACAAACATGAAACTGAAAATTCTACTTTGGATAAGAGAAACAGCACAGAAAATGAAAAATCATCAGCACTAGGTGCCCAAGATCATGCCTTATTATTGAGTAGCAGTTCATATCCTTTAGGCGGGGCAAATATTATAAAAAGTGAAAGATTAAAGCATGTAAAGTCGGTGAGGTCACCAGCAGATTCAGCCAGGATTACAGGATCACTTGGTAGCTATCATAATTTGGATGTGAAGGGAATTGGCATTGTTGGAGATGCACAAAACAGTGGAGGAAATATCAGAAGCAGCGACAAAAAAGATGCTAAAATTTATCCAAAGGAAGCGAGAATGACCATTCTAGACAGCAAAGTCGAGCATTTAGAAAACAAGATAAAGATGCTTGAAGGAGAGTTAAGAGAAGTTGCAGCAATTGAGGCTTCTTTATATTCAGTAGTTGCAGAGCATGGAAGCTCCATGAGTAAGGTCCATGCTCCAGCACGGCGTCTTTCTAGGCTGTATCTCCATGCCTGTAAAGAAAACCTTCGAGCAAGAAGGGCTGGGACAGCAAAAAATGCTGTTTCTGGGTTAGCACTTGTCGCTAAGGCATGTGGACATGATGTCCCAAGGCTGACATTTTGGTTGTCTAATATCATTGTTTTGAGGACAATTATATGCCAAACTTCCAAAGACACGGTACAATCAGTTTCTGCAGATTCTAGTGTAAAAGGGAAAAGTGAGGGAGAGAGGAATGGCAAGACAACACACTCATTACGATGGAAGGGGTCTTCACCTGGTGAAAATGAAAGTTCAGCACCAGAACACAGAGGTTTTGATAACTGGGATGAACCCCATGCGTTCACGTCAGCACTGGAAAAGGTAGAAGCCTGGATATTCTCTCGCATAGTGGAATCTATCTGGTGGCAGACTCTGATTCCACACATGCAACCTGATGCAATAGCCTCTAAAAAGGATGTGGACTCTGCCTCAAGGAAAAGCTATAGAAGGATGTCTAGCTCATGTGATCAGGAGCAGGGGAACATTTCACTAGATATTTGGAAGAATGCTTTTAGAGAATCCTGGGATAGGCTCTGTCCAATTCGAGCTGGAGGACATGAGTGTGGCTGTTTGCCTGTGCTGTCTAGATTGATAATGGAGCAATGTGTGACAAGATTAGACGTGGCTATGTTCAATGCCATTCTTCGTGAATCTGCTGATGAAATCCCTACCGATCCTCTATCTGATCCCATTAGTGATCCCAAGGTTCTCCCCATTCCACCTGGGCAATTAAGCTTTGGAGCTGGGGCACAGCTTAAAACTGCGATTGGGAACTGGTCTAGATGGTTGACTGACTTGTTTGGTATGGATGACGATGACTCATTTGAAGATAAGGACGACCCTGATGACAATGATGGGAGACAAGATACATCCTTGAAGTCCTTCCATCTTCTAAATGCATTAAGTGACCTTCTGATGCTTCCCAAGGATATGCTGTTCAGTTCTACTGTCAGGAAAGAGGTATGCCCAAAGTTTAGCGCACCACTTATCAAGAGGATTCTAGACAATTTTGTTGCAGATGAGTTTTGCCCTGACCCAATCCCCACAGTTGTTTTTGAAGCTCTGGACTCGGAGGATGATCTCGACGATTGTGGTGAGGAGTGCGTTAGAACCTTCCCATGCAATGCAGCTCCAATTGAGTACTTACCTCCTCCGGCAATTTCCATTGTTGCCATTATTGGGGAGGTTGGAAGTGAACGTCAACTAAGAAGCAGCAGATCATCTGTTCTGAGGAAGGCTTACGCGAGTGATGATGAGCTTGATGAACTAAATTCCCCTTTATCTTCTATCCTAATTGATGCCTCCGCTTCTTCAGTCGCTTCAACAAAACCAGGCTGGAAAACCAAAGAAATTCGCAACTTAACTACTGTCAGATATGAACTACTAAGGGACGTATGGGTGAGCAGCGAGTAG 3315 0.4271 MKILFSAVSSAFHYFPLLYFRFCIVRTFSIPSDARSSVRYAVGLITSAAMVSGLKAKSRGSASVKINYLIHIEEIKPWPPSQSLRSVRSVLIQWENGERYSGSTGHVVPSLGSDTDEGKIEFNESFRLPVTLLRDMSIRSGNADVFQKNCLEFNLYEPRRDKTLKGQSLGTAIIDLADYGIFKETLSISAPMNCKRNYKNTGQPLLFVKIQPVEKSRTNSLSRDSLSKVAPKDVNGGDSTLKNEEYIEEAGIATFSDDDVSSHSSVAAVASALGDNRCIPAELVENGSTQKTDRDEKERLARLEKTNMMPQDTYQKLERGSSSTSSLDISSDLGSPVNGHASSNSTNCYSVITQKHAVTPNAYSSYPSLAHDKLEADFKIKTRNSGSKHSDEEVHEKVVNHRNTVTDVQMYSKNQGAVNCDVSEVIDKFDGIYEEGDKYCVKEEGGGKFYNSYVEDKHETENSTLDKRNSTENEKSSALGAQDHALLLSSSSYPLGGANIIKSERLKHVKSVRSPADSARITGSLGSYHNLDVKGIGIVGDAQNSGGNIRSSDKKDAKIYPKEARMTILDSKVEHLENKIKMLEGELREVAAIEASLYSVVAEHGSSMSKVHAPARRLSRLYLHACKENLRARRAGTAKNAVSGLALVAKACGHDVPRLTFWLSNIIVLRTIICQTSKDTVQSVSADSSVKGKSEGERNGKTTHSLRWKGSSPGENESSAPEHRGFDNWDEPHAFTSALEKVEAWIFSRIVESIWWQTLIPHMQPDAIASKKDVDSASRKSYRRMSSSCDQEQGNISLDIWKNAFRESWDRLCPIRAGGHECGCLPVLSRLIMEQCVTRLDVAMFNAILRESADEIPTDPLSDPISDPKVLPIPPGQLSFGAGAQLKTAIGNWSRWLTDLFGMDDDDSFEDKDDPDDNDGRQDTSLKSFHLLNALSDLLMLPKDMLFSSTVRKEVCPKFSAPLIKRILDNFVADEFCPDPIPTVVFEALDSEDDLDDCGEECVRTFPCNAAPIEYLPPPAISIVAIIGEVGSERQLRSSRSSVLRKAYASDDELDELNSPLSSILIDASASSVASTKPGWKTKEIRNLTTVRYELLRDVWVSSE 1104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1263 1104 Coils Coil 566 593 - -
Lele16g1263 1104 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 61 184 IPR019448 -
Lele16g1263 1104 MobiDBLite consensus disorder prediction 218 237 - -
Lele16g1263 1104 MobiDBLite consensus disorder prediction 309 340 - -
Lele16g1263 1104 MobiDBLite consensus disorder prediction 458 478 - -
Lele16g1263 1104 ProSiteProfiles C2 NT-type domain profile. 56 214 IPR019448 -
Lele16g1263 1104 PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP205 562 1100 IPR021827 GO:0005643
Lele16g1263 1104 MobiDBLite consensus disorder prediction 684 728 - -
Lele16g1263 1104 MobiDBLite consensus disorder prediction 458 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1263 Lele-ChrLele16 7148864 7154995 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g0596 07 3401805 3402221 Lele16g1263 16 7148864 7154995 CCT
Lele05g0567 05 3327971 3334711 Lele16g1263 16 7148864 7154995 CCT
Lele13g1228 13 22626901 22632351 Lele16g1263 16 7148864 7154995 hybridization
Lele14g1124 14 20954694 20960018 Lele16g1263 16 7148864 7154995 hybridization