Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1260 ATGTTTTCCGGCTTGGTAGCGTTTGGGGTAGTACGGACCGGGTCATTGCCGGTGTTATCAGGGGTAGTGAAGATGACGAATAAGCCTTTCGAGGCCAAGCATTTTCTGAGTCGGAGAAGAGGATCGTACAGAATGAGAAGAGAGATGGTTATAGGAATAGAGAGGAACTTTAGACCTGAAAGTCTTGCTCCATTTTCCTCTATTCCTCCCAAAAAGTCAAACATGTGGAACACTGAACTCTCTATCGGTTTAGCTGGGGGTGTAGTTGGAATTTGCATTGTTTTTGCAGCAGCCATCCTTGTAATCAGATTAAAGAACAAAAAGGAAGAGAATGGGTTTGGGAAAGGAGGAGACTTGGAGCTTCAGAATCTCAACCTCAGTGTAAGAACAACCTGCGACAAGAAGGTTTCTTTTGAGGGATCTCCCGGCAATCTTAAAGGGAAAATTATCGACACCACACCACGTAAGATGCTCCTGGAGACATACGCTATTGAAGAGTTGAGGAAAGCAACTGAGGACTTCAATTCAACAAATCAAATTGAGGGACCTGTTTTTCAAGGTCGTCTCAATGGGAAGAGCGTGGCAATCAAGCGCACAAACAAAGAGACACTGACAAAGATATATTTTGGACTCTTCAATGAAGCACTTTACCACCACCCCAACATCCTTAAACTGCTCGGAACGTGCTCAACTGAGGGTCCTGATCCTGAATCATATCTGGTTTTTGAATTTGCAGAAAATGGATCTCTGAGAGACTGGCTTCACTCTGGGCTGGCCATCAAGAACGAGTTCATTGCTTCCTGCTATTGTTTCCTTTCATGGAGCCAGCGGCTAAGGATCTGCCTTGATGTGGCCATTGGTTTGCAGTATATGCACCGCGTGATGAACCCAAGCTACGTGCACAGAAATGTGAAGAGCAGAAACATATTTTTAGACGAAGACTTTGGTGCAAAGATAGGGAATTTCGGGATGGCAGGGTGTGTTGAGAATGAAACTGAGGACCAACTTTCGTATTCAACCAATCCTGCTTCTTGGAGCCTAGGCTATTTGGCCCCTGAATATGTTCACCAAGGTAAAATTTCCACAAGCATTGATATTTTTGCTTATGGGGTAGTTTTGCTGGAAATGCTTTCAGGTCAAACACCCATAAGCAAGCCCAATGAGAAAGGAGAAGGAAGCATTTGGCTCACAGAGAAAATCAAGTCCATTTTGAAGTCAGAGAATAACGTGGATGAACTAAGGGAGTGGATGGACAGTGCATTGGGTGAGAATTACTCATTCGATGCAGCTTTCACAGTTGCAAAACTTGCAAGAGCTTGTGTAGATGAAGACTCCTCTCTCAGGCCAAACGCTGGGGAAGTTGTTGAGAAGCTATCAAGATTGGTTGCAGAGTTACCTGAAGAAGAGCATTTGTTGTTGTCTGAAAGCTCAACTAAACCTCTGGTCAAGATACCTCCAAACAATCAGTGA 1470 0.4422 MFSGLVAFGVVRTGSLPVLSGVVKMTNKPFEAKHFLSRRRGSYRMRREMVIGIERNFRPESLAPFSSIPPKKSNMWNTELSIGLAGGVVGICIVFAAAILVIRLKNKKEENGFGKGGDLELQNLNLSVRTTCDKKVSFEGSPGNLKGKIIDTTPRKMLLETYAIEELRKATEDFNSTNQIEGPVFQGRLNGKSVAIKRTNKETLTKIYFGLFNEALYHHPNILKLLGTCSTEGPDPESYLVFEFAENGSLRDWLHSGLAIKNEFIASCYCFLSWSQRLRICLDVAIGLQYMHRVMNPSYVHRNVKSRNIFLDEDFGAKIGNFGMAGCVENETEDQLSYSTNPASWSLGYLAPEYVHQGKISTSIDIFAYGVVLLEMLSGQTPISKPNEKGEGSIWLTEKIKSILKSENNVDELREWMDSALGENYSFDAAFTVAKLARACVDEDSSLRPNAGEVVEKLSRLVAELPEEEHLLLSESSTKPLVKIPPNNQ 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1260 489 Gene3D Transferase(Phosphotransferase) domain 1 245 476 - -
Lele16g1260 489 Gene3D Phosphorylase Kinase; domain 1 150 244 - -
Lele16g1260 489 SUPERFAMILY Protein kinase-like (PK-like) 157 458 IPR011009 -
Lele16g1260 489 Pfam Protein kinase domain 183 456 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele16g1260 489 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 67 465 - -
Lele16g1260 489 FunFam PTI1-like tyrosine-protein kinase 3 245 471 - -
Lele16g1260 489 ProSiteProfiles Protein kinase domain profile. 105 473 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1260 Lele-ChrLele16 7133969 7136605 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1260 70 483 LysM Receptor-like Kinase (LYKs) Gene Family AT3G01840 42.953 1.23e-108 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Lele16g1260 Pkinase 1.5e-33 CL0016