Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1237 ATGGAGAATTATGCCCTGTTGTTCCCTGGTCCTACTTCTTCTTCTTCAAGCTATCAAGTGCCGAGGAGTGCCATGGGAGCCTCTTATCATCATGGATTTAGTAGCTTTGATGGCCAAATCTCGAATGGGTTTCTGGGTTTGAGGCCCAGTGATCATCAAAGCAATGATTTGCAGAAAATTAGAGGAGAAGTAGTTAGAGATGGGCCGTTATCTCAGAGCGGAAATGAGAAGGATGATCATGATCAGATAGGTGGTGATGGTGGTCGTGGTGGTGGTACGGGGAAAAAGAAAGGAGAAAAGAAGGTTAGAAAGCCTAGATTTGCTTTCCAAACTCGGAGCCAGGTTGACATTCTTGATGATGGCTACAGATGGAGAAAATATGGCCAGAAAGCTGTTAAAAACAACAAATTCCCCAGGAGCTACTACAGATGTACTCATCAAGGGTGCAATGTGAAGAAGCAAGTTCAACGTCTAACGAAAGACGAAGGGGTAGTGGTGACCACATATGAAGGAGTTCACACACACCCAATTGAGAAGACAACGGACAACTTCGAGCACATTTTAAGTCAGATGCATATATACACTCCCTTTTAA 594 0.4394 MENYALLFPGPTSSSSSYQVPRSAMGASYHHGFSSFDGQISNGFLGLRPSDHQSNDLQKIRGEVVRDGPLSQSGNEKDDHDQIGGDGGRGGGTGKKKGEKKVRKPRFAFQTRSQVDILDDGYRWRKYGQKAVKNNKFPRSYYRCTHQGCNVKKQVQRLTKDEGVVVTTYEGVHTHPIEKTTDNFEHILSQMHIYTPF 197
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1237 197 Gene3D WRKY domain 95 177 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele16g1237 197 SMART WRKY_cls 118 177 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele16g1237 197 MobiDBLite consensus disorder prediction 67 104 - -
Lele16g1237 197 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 39 180 IPR044810 GO:0003700
Lele16g1237 197 SUPERFAMILY WRKY DNA-binding domain 110 177 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele16g1237 197 ProSiteProfiles WRKY domain profile. 113 178 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele16g1237 197 Pfam WRKY DNA -binding domain 119 176 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele16g1237 197 MobiDBLite consensus disorder prediction 1 20 - -
Lele16g1237 197 FunFam WRKY transcription factor 57 104 178 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele16g1237 Lele-ChrLele16 7021387 7023032 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1237 106 197 WRKY Transcription Factor Family AT5G13080 85.870 3.08e-57 175
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele16g1237 WRKY 1.9e-26 CL0274