Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1233 ATGGATCCCAAGGGCTCAAAGAAGCCAGATGAGGCATCCAACAATAAGTTCTTGAATCTCCCACGGGCACAATCCAACATGGGGGAGAACAATAAAGGAGCAGCCGAAGTGAGGGATTTCCAGATTTCGATCGCAGAAAAAGAAGACAACAGCAAGAACAAACAGTTAGCCCCCAAGAGAGCTTCCAACAAAGATAGACACACCAAGGTGGAAGGCAGAGGAAGAAGAATAAGGATGCCCGCTCTATGTGCGGCTAGAATCTTTCAGTTGACCAGAGAATTGGGTCACAAATCTGATGGAGAAACCATACAGTGGCTCCTCCAGCAGGCGGAGCCGTCCATAATCGCGGCCACCGGAACCGGGACAATACCGGCATCTGCTTTAGCTGCAGCAGGGGGCTCTGTTTCGCAAGAGGGGACCTCTCTATCTGCAGGATTACACCAAAAAATGGATGAATTAGGGGGGTCCAATATAGGGTCAGGAAGTAGGACCAGCTGGGCAATGGTTGGTGGGAATTTGGGGAGACCCCATGTGGCCACAGGTCTATGGCCTCCTTCTGTCAGTGGATTTGGGTTTCAGTCATCATCATCATCTTCTGGTCCATCTGCACCCAGTTTAGGGACTGAGAGTTCAAATTACCTCCAAAAAATTGGCTTCCCTGGCTTTGACTTGCCTGCAGCTGCAGCAGCAGCCACTAACATGGGTCATATGAGTTTTGCCTCAATTTTGGGAGGACCAAATAACCAGCAGATTCCCGGTTTGGAGCTGGGGCTGTCTCAAGATGGTCATATAGGGATTTTGAACCCACAAGCCTTGACCCAGATTTACCAGCAGATGGGTCAAGCTAGAGTACCCCTACAACAGCAGCATCAGCATCAGCATCCTCCTTCTAAGGATGATTCTCAAGAATGTAGCTTTGCCCAGAGGCTGAGGTTTCAACGATGGCTTCTGTGTTGTTTTATATTTGGAAGACGCCAGGACATAGATGCCTCAGATTCAGAGCTTTCAATAGGACCTGGATTTTGTTGTCACCCTTCTTGTTTCTGCACTGCAGCGCTCAACTCTCCGGGAACAGATGGAATTGCGCTGCCAGATAGCTCGGGTTTGGGCTTAAAACTCTTGTTTAATTCAGAGTTCCTTAATCATCTGAAAGATTCTGATCAGTGCATGGAACAACAGTTGGAAGTTACATCTGGCTGA 1200 0.4858 MDPKGSKKPDEASNNKFLNLPRAQSNMGENNKGAAEVRDFQISIAEKEDNSKNKQLAPKRASNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALAAAGGSVSQEGTSLSAGLHQKMDELGGSNIGSGSRTSWAMVGGNLGRPHVATGLWPPSVSGFGFQSSSSSSGPSAPSLGTESSNYLQKIGFPGFDLPAAAAAATNMGHMSFASILGGPNNQQIPGLELGLSQDGHIGILNPQALTQIYQQMGQARVPLQQQHQHQHPPSKDDSQECSFAQRLRFQRWLLCCFIFGRRQDIDASDSELSIGPGFCCHPSCFCTAALNSPGTDGIALPDSSGLGLKLLFNSEFLNHLKDSDQCMEQQLEVTSG 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1233 399 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 24 294 IPR005333 GO:0003700
Lele16g1233 399 MobiDBLite consensus disorder prediction 1 72 - -
Lele16g1233 399 ProSiteProfiles TCP domain profile. 63 117 IPR017887 -
Lele16g1233 399 MobiDBLite consensus disorder prediction 41 72 - -
Lele16g1233 399 MobiDBLite consensus disorder prediction 283 302 - -
Lele16g1233 399 MobiDBLite consensus disorder prediction 17 31 - -
Lele16g1233 399 Pfam TCP family transcription factor 62 147 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1233 Lele-ChrLele16 6986512 6988013 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1233 29 276 TCP Transcription Factor Family AT3G27010 60.392 7.15e-84 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lele16g1233 TCP 1.3e-30 No_clan