Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1221 ATGGAGATGCTTCCGAGCTTTGTCGTTACTGGAGGCGTTAAGATGCCTATTGGCTACAGGTTCTGCCCCACAGATGAAGAGCTTATAGTTCACTATCTCCGGAAGATGGCTCTTGGCCTGCCATTGCCGGCGAATGTGATTCCTTTTCTCCATGTGTTTCAGACTGATCCTTGGAAGCTTCCAGGTGTTGGCGAAGCTGTTTCCCTTGAAAAGGGGTATTTCTTCGGCGAGAAGAAGGATATTTTCTATGAAGGCATAATCGTGATATCTGAAGGCACTGGCTTCTGGAAACCCACTGGGAAAGAGAAACTGATTGTTTCTTCTCTGACTAACCAAGTGATCGGTACTAGGAAAAACTTGGTTTTCTGCGGCGGCGACTATTCCGACAAGACCCAGACGCAATGGGTCATGCATGAACTGCGCCTCACCGTCCCCGGAATGACTGTTTTCCCACCAAAGATGATGCCATGGACAAAGTTGGCTGTGTACCGGGTTTTTCAGAAGAAGAAGAAGCCCAAGAGAAAAAGGTCTGCGAAGAAGCAATCCAACAACAAAAAACTTCAGAAGCTCGGTGTCAAACCCAGTTTCGTTGATTTCGCCGCTGATGGCTATGACTCCGACGATGCCCCGCCGCCGTCTCCGAGTAACAGCGAAGGAAGTGACATCACCGCTTCTAACTAG 681 0.489 MEMLPSFVVTGGVKMPIGYRFCPTDEELIVHYLRKMALGLPLPANVIPFLHVFQTDPWKLPGVGEAVSLEKGYFFGEKKDIFYEGIIVISEGTGFWKPTGKEKLIVSSLTNQVIGTRKNLVFCGGDYSDKTQTQWVMHELRLTVPGMTVFPPKMMPWTKLAVYRVFQKKKKPKRKRSAKKQSNNKKLQKLGVKPSFVDFAADGYDSDDAPPPSPSNSEGSDITASN 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1221 226 MobiDBLite consensus disorder prediction 172 226 - -
Lele16g1221 226 Gene3D NAC domain 24 191 IPR036093 GO:0003677|GO:0006355
Lele16g1221 226 SUPERFAMILY NAC domain 7 168 IPR036093 GO:0003677|GO:0006355
Lele16g1221 226 MobiDBLite consensus disorder prediction 210 226 - -
Lele16g1221 226 ProSiteProfiles NAC domain profile. 15 168 IPR003441 GO:0003677|GO:0006355
Lele16g1221 226 Pfam No apical meristem (NAM) protein 16 142 IPR003441 GO:0003677|GO:0006355
Lele16g1221 226 PANTHER NAC TRANSCRIPTION FACTOR 56 15 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1221 Lele-ChrLele16 6887510 6888478 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1221 7 184 NAC Transcription Factor Family AT5G13180 37.222 2.39e-32 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele16g1221 NAM 2.7e-24 No_clan