Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1208 ATGATGATGGATCAGGGAGAGAAGCTGCTTTGCAAAAACGAGGCCTCTGCTTTGATGGCAGCTGTTGACGCTGAGCTTGCCCTTGTCACCGTCCCAGTAGACATCAACCATATTAATCCCGGGTCGGGTCGTCCTACGATCCGAGAACTCGGCCTTGTCGCTGCCGTTACCACCTCTTTTGGGACCGTTCATAGGAAGAAAAGGATGGCCAGGCAGAGGAGGTCCTCCACCGAAATTGATCACGGGAGGTTGAGATTCCTTTTCCAAAAGGAGCTCAAGAATAGCGACGTAAGCTCCCTCCGGAGGATGGTGCTCCCAAAGAAAGCAGCGGAGGCTTTCCTTCCTATCCTTGAGTCTAAAGAAGGAATTGTCATAAGCATGGATGATATAGATGGACTTCATGTGTGGAGCTTCAAGTACAGGTTTTGGCCTAATAACAACAGTCGAATGTATGTACTTGAAAACACCGGGGAATTTGTTAGCACACATGGCTTACGTCTTGGAGATTCCATAGTGGTTTATCAAGATAATCAAACCCTTAATTATGTGATTCAAGCTAAAAAGGCTTCTGAGCAAGACGATTTTATGGCTACATCTAGTGATAACATCAATGATTTCTTTCTACAGGAGTATGGGTTTAACAAGTCAAATAGTTTGAGTTTGATGACCTATCCCACGACGAATGACACAGACATGTCATTCATATATGACACTACATTCTCAAATGATTCTCCATTTGACTTTTTGGGTGGATCAATGACCAACTTCTCAAAGATTGGATCTGTGGAGACCTTTGGCTCTGTCGAGAATTTGTCACTCGATGACTTCTATTAA 834 0.4424 MMMDQGEKLLCKNEASALMAAVDAELALVTVPVDINHINPGSGRPTIRELGLVAAVTTSFGTVHRKKRMARQRRSSTEIDHGRLRFLFQKELKNSDVSSLRRMVLPKKAAEAFLPILESKEGIVISMDDIDGLHVWSFKYRFWPNNNSRMYVLENTGEFVSTHGLRLGDSIVVYQDNQTLNYVIQAKKASEQDDFMATSSDNINDFFLQEYGFNKSNSLSLMTYPTTNDTDMSFIYDTTFSNDSPFDFLGGSMTNFSKIGSVETFGSVENLSLDDFY 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1208 277 CDD B3_DNA 86 188 IPR003340 GO:0003677
Lele16g1208 277 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 68 199 IPR044800 GO:0003700
Lele16g1208 277 SUPERFAMILY DNA-binding pseudobarrel domain 86 185 IPR015300 -
Lele16g1208 277 SMART B3_2 88 190 IPR003340 GO:0003677
Lele16g1208 277 Pfam B3 DNA binding domain 88 186 IPR003340 GO:0003677
Lele16g1208 277 Gene3D - 84 203 IPR015300 -
Lele16g1208 277 ProSiteProfiles B3 DNA-binding domain profile. 88 190 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1208 Lele-ChrLele16 6802926 6806030 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1208 1 277 B3 DNA Binding Superfamily AT3G26790 45.646 1.73e-80 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Lele16g1208 B3 5.9e-16 CL0405