Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1189 ATGGGGGTGCAACCGCTGAACCGTGTTAGTCCGAATCAGAGTCCTACTGCTAACAGTGAGCTGGGTGCTGGAATGGGGCGTCGTCATTCCGTGGTTTTGACCCCCAAGCGTAATATTGTACCTAATGGTCATAAATGTGACAAGACTGAGGAACCAAATGGTTCAAACAGTTCGTCAATTCAGAGAAGAACCAGTCCTCGATTACAAGTCAAGCAAAAAGTTGATACAGAACTTTCAGTGTGCCGCAGAGATGAGCTGCTCGACAAAGCTGGTGGTGCGAAGATGAGTACCCGTAAAACAAATGTTAACTACGAAAATGTTGATAAGCAACAGGTAGTTGGAGGACCAAAGAGAACTAAAAATATGGATAATTCAACAACTAAGAAAGCACAAGAGTCTAAGGAGTCTTTAATACAGAGAAGAACTAGCCCTCGAATCCAAGCCAAACAAAAGGTGGATAAGACACTTCCAGTGTCCAGTAGGGTGCAGTTGTCGGGTGACCGAGACGATGCCAGTGATGCGAAGAAGAGTACAACCCGCAAAAGAAGTCGCAATGAAGAAAATGTGTGTAAGGAAAATGTTGTGGAGGACCAACTGAAAGCTAACAAATTGAATGAGTCAATTACTGAAGAGCCAAATGAGGACAATGAATCGTCAGCTCAAAGGATAGCTAACTCTCGGGTTCAGAATAAGGAATTTCTAGTGCGACGTAGAGTAGAGTTATTAGAGGATCGGGATAACGTGGGTGATGATAAGAAAAGCAAGTGTTCCAAAAGGAGTGTCAATGATGAAAACGGGGATGAACATGGGAGTAAGGAAGGGGGAGTAGGTAAGCCACCTAGAGTAAAGAAGCTGAAAGGGGCTACCTTGGTTCATAACAAACAGACATCTGCGGGTTCGAAAGCAAATGGGGCAGGGAATTTGGCAGATAAAAGTGACTTTGTCAAGGTGAAAGAGACGTTGAGGTTGTTTAACAAGCATTATCTTCATTTTGTTCAGGAGGAGGAGAAGAGGTGTAAAGTGGAATCTTCCCTCAAAGCGTCTAAAGGAGGTTCAAAATCTAAGGAGGAGGAGAAGAGGTGCAAGAAAGTGGAATCTTCCGTCAAAGCGTCTAAAGGAGATTCAAAATCTAAGAAAAATGCAACGGTTGAAGTTGAAAAGAATATGGCTAAGCGACCTGATTTGAAAGCATTATCCAAGATGTTGGAAAATAAGGAGACACTGTATCCTGAGAAAAGAATTGGTGATATTCCAGGTATTAAGGTTGGACATCAATTCTATTCGCGTGCTGAAATGGTTGCTGTTGGGTTTCATAGCCACTGGCTAAATGGCATAGATTATATGGGTCAAGCTTATTCCAAAGTGTCACAGTTCAGTCACTATGAATTTCCAGTTGCTGTGGCCATTGTTTTGTCGGGGATGTATGAGGATGATCTTGATAATGCTGAGGACGTTGTATATACGGGTCAAGGTGGGCATAATTTGACCGGTGATAAGCGTCAAATTCGGGATCAGGTGTTAAAGCGGGGTAATCTGGCTCTGAAGAACTGCATGGAGCAATGTGTATCTGTAAGGGTGGTTCGTGGACATGAATCTTCAAACAGTTACAGTGGCAAAGTATACACATATGATGGCTTGTATAAGGTTGTTAATTATTGGGCAGAAAAAGGAATATCTGGGTTTACAGTCTACAAGTTTCGGCTGAGGAGGCTTGATGGGCAACCAACCTTGACAACTAACCAGGTGTATTTCATTAATGGACGTGCTCCTCAGTCCATTGCTGAAATACGAGGGCTTGTATGTGAGGACATCACCGAAGGTGAAGAGGATGTGCCTATTCCAGCCACTAACCTGATTGATGTACCCCCTGTTGCACCCACAGGTTTTAAATATAAACAATCAATTTTGCTTTCAAAGAATGTAAAGCTCCCCACAGCTGTCGCTGGATGCAAGTGCAAAGGCTTATGTGTGGATCCTACATCCTGTGAATGTGCTTTACGAAATGGATCTGATTTTCCCTATGTATCTCGTAATGGAGGGAGGTTAATTGAAGCCAAAGATATTGTCTTTGAATGTGGGCCAAACTGTGGATGTGGTCCTGGTTGTGTGAATCGAACCTCTCAAAGAGGACCAAGATATCGTCTTGAGGTTTTTCGTACTGCAAAGAAAGGATGGGCTGTTAGATCTTGGGATTTTATACCTTCTGGAGCAGCAGTTTGTGAATACACAGGATTAATCAGGAGGACAGAAGATGTGGAGAATACACTAGAGAACAACTATATTTTTGAGATTGATTGTTTGCAAACGATGAAGGGCATTGGTGCAAGAGAGAGGCGATCACAAAATGAAACATCTACAGCAGTCAAGCTCTTGGACAATTATGCAGATGACAATTCTGAGTCCGTACCAGAGTTTTGTATTGATGCTGGATCAACTGGAAATATTGCTCGATTCATAAACCATAGTTGTGAACCAAATTTATTTGTTCAATGTGTTTTGAGCTCACACCATGATTTAAGGCTGGCACGAGTGATGTTATTTGCTGCAGACAACATACCACCTTTGCAGGAGCTTACATATGACTATGGTTATGCCCTTGATAGTGTCTTGGGTCCTGATGGGAAAGTAAAGAAAATGATGTGTTATTGTGGAGCTGCTGACTGCAGGAAGCGACTATTCTAA 2682 0.4262 MGVQPLNRVSPNQSPTANSELGAGMGRRHSVVLTPKRNIVPNGHKCDKTEEPNGSNSSSIQRRTSPRLQVKQKVDTELSVCRRDELLDKAGGAKMSTRKTNVNYENVDKQQVVGGPKRTKNMDNSTTKKAQESKESLIQRRTSPRIQAKQKVDKTLPVSSRVQLSGDRDDASDAKKSTTRKRSRNEENVCKENVVEDQLKANKLNESITEEPNEDNESSAQRIANSRVQNKEFLVRRRVELLEDRDNVGDDKKSKCSKRSVNDENGDEHGSKEGGVGKPPRVKKLKGATLVHNKQTSAGSKANGAGNLADKSDFVKVKETLRLFNKHYLHFVQEEEKRCKVESSLKASKGGSKSKEEEKRCKKVESSVKASKGDSKSKKNATVEVEKNMAKRPDLKALSKMLENKETLYPEKRIGDIPGIKVGHQFYSRAEMVAVGFHSHWLNGIDYMGQAYSKVSQFSHYEFPVAVAIVLSGMYEDDLDNAEDVVYTGQGGHNLTGDKRQIRDQVLKRGNLALKNCMEQCVSVRVVRGHESSNSYSGKVYTYDGLYKVVNYWAEKGISGFTVYKFRLRRLDGQPTLTTNQVYFINGRAPQSIAEIRGLVCEDITEGEEDVPIPATNLIDVPPVAPTGFKYKQSILLSKNVKLPTAVAGCKCKGLCVDPTSCECALRNGSDFPYVSRNGGRLIEAKDIVFECGPNCGCGPGCVNRTSQRGPRYRLEVFRTAKKGWAVRSWDFIPSGAAVCEYTGLIRRTEDVENTLENNYIFEIDCLQTMKGIGARERRSQNETSTAVKLLDNYADDNSESVPEFCIDAGSTGNIARFINHSCEPNLFVQCVLSSHHDLRLARVMLFAADNIPPLQELTYDYGYALDSVLGPDGKVKKMMCYCGAADCRKRLF 893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1189 893 MobiDBLite consensus disorder prediction 122 139 - -
Lele16g1189 893 Gene3D - 398 586 IPR036987 -
Lele16g1189 893 SMART preset_2 601 697 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Lele16g1189 893 SUPERFAMILY SET domain 598 870 IPR046341 -
Lele16g1189 893 MobiDBLite consensus disorder prediction 166 210 - -
Lele16g1189 893 Pfam SAD/SRA domain 414 574 IPR003105 -
Lele16g1189 893 MobiDBLite consensus disorder prediction 1 20 - -
Lele16g1189 893 MobiDBLite consensus disorder prediction 247 280 - -
Lele16g1189 893 MobiDBLite consensus disorder prediction 1 74 - -
Lele16g1189 893 ProSiteProfiles SET domain profile. 713 863 IPR001214 GO:0005515
Lele16g1189 893 ProSiteProfiles YDG domain profile. 415 570 IPR003105 -
Lele16g1189 893 ProSiteProfiles Post-SET domain profile. 877 893 IPR003616 -
Lele16g1189 893 SUPERFAMILY PUA domain-like 397 583 IPR015947 -
Lele16g1189 893 SMART G9a_1 410 574 IPR003105 -
Lele16g1189 893 MobiDBLite consensus disorder prediction 88 225 - -
Lele16g1189 893 MobiDBLite consensus disorder prediction 340 384 - -
Lele16g1189 893 Gene3D SET domain 594 893 IPR046341 -
Lele16g1189 893 MobiDBLite consensus disorder prediction 52 67 - -
Lele16g1189 893 Pfam Pre-SET motif 604 705 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Lele16g1189 893 Pfam SET domain 724 863 IPR001214 GO:0005515
Lele16g1189 893 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 231 893 IPR025794 GO:0016571
Lele16g1189 893 SMART set_7 713 869 IPR001214 GO:0005515
Lele16g1189 893 ProSiteProfiles Pre-SET domain profile. 648 710 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Lele16g1189 893 MobiDBLite consensus disorder prediction 247 286 - -
Lele16g1189 893 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 120 886 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1189 Lele-ChrLele16 6697371 6707758 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1189 401 893 EF-hand Containing Proteins AT5G13960 65.182 0.0 699
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lele16g1189 SAD_SRA 4.8e-49 CL0178