Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1182 ATGGTTAGCTGGTTACAGTTAAAGAATACAAGGGTTCCTAGTTTTCGAGATGTGCTGTCGGCGCAAGGTCACTTTCAGTCGGCATTGTCTGCATCCGACGATTATTGTCACCACTCATCACCACCACCTTTGAAGAAGCACATTGATTTGGACCTCGCGAGTCAAGTCTTGTCTTGGAATCTTGCAGCAACAGTAGGAGGAGCTGCAGGAGCCGTGGCATTGGTTGGGATAATTATAGTTCTGATATGGTTCTGTCTGTTTCACAAGAGCAGTGTTTCTAGAAATTCAGACACAGGGTCTTCTGATCCTTCACAAGTGGGAAGACATGGTGGATTCGAGCTAACAGTAAGAGATGCTAGGCGTTTTGAGATTGAAGAACTGTCTCAGGCTACAAAAAATTTCAGTGACAAGAATCTGATTGGAGTAGGCAAATTTGGGGAGGTTTATAGGGGTTTACTTCACGACGGAATGCTTGTAGTCATCAAAAAGCGCCATGGATTCCCTAGTCAGGAGTTTGTAGATGAGGTACACTTCCTCTCATCGATTCAACACCGAAATCTTGTAACTCTTTTGGGATACTGCCAGGAAAACAATTTGCAGTTTCTCATATATGAATACGTGCCTAATGGGAGTGTCTCCAGTCACTTGTATGGAGCTGGTCAACAATCACGTGAGAAGCTGGAATTCAAGCATAGACTTTCAATAGCTCTAGGTGCAGCTAAAGGTTTGGCTCATCTTCACTCCTTGAGCCCTCGTTTGGTGCATAAGGATTTCAAAACAGCCAATGTTCTTGTGGATGAAAACTTCATTCCTAAGGTTGCTGATGCAGGGCTTCGCAACTTCCTAGGAAGAGTTGAAATTGCAGGGCCATCTTCTCAAGTTGCAGTAGATGAAATCTTCCTTGCTCCTGAAGTGAGAGAATTCAGAAGATTTTCTGAAAAGAGTGATGTATACAGTTTTGGGGTATTTTTGCTGGAACTGTTCAGCGGCAGGGAAGCAATTGAATCACCATCTCTAGACTCAAATCAGAACCTAGTTGAATGGGTGCAAAGTAAGCAAGAACCTGGGATAATGTCGAACATAGTTGATGAAAGAATGGGAATCAATTATACAGAAGAAGGGGTGGAGGAGTTTATGTCACTGATAGTTCCATGTATTGATACTTCAAGTGAGAGACGACCAACAATGAGCTATGTGGTGATGGAAATGGATCGAATACTTGAGAAAGAAAGAAACTTGACGACAGTGATGGGAGAAGGAACCCCAATTGTGACCCTTGGAAGCCAATTATTTAAATCTACAAAATAA 1308 0.4274 MVSWLQLKNTRVPSFRDVLSAQGHFQSALSASDDYCHHSSPPPLKKHIDLDLASQVLSWNLAATVGGAAGAVALVGIIIVLIWFCLFHKSSVSRNSDTGSSDPSQVGRHGGFELTVRDARRFEIEELSQATKNFSDKNLIGVGKFGEVYRGLLHDGMLVVIKKRHGFPSQEFVDEVHFLSSIQHRNLVTLLGYCQENNLQFLIYEYVPNGSVSSHLYGAGQQSREKLEFKHRLSIALGAAKGLAHLHSLSPRLVHKDFKTANVLVDENFIPKVADAGLRNFLGRVEIAGPSSQVAVDEIFLAPEVREFRRFSEKSDVYSFGVFLLELFSGREAIESPSLDSNQNLVEWVQSKQEPGIMSNIVDERMGINYTEEGVEEFMSLIVPCIDTSSERRPTMSYVVMEMDRILEKERNLTTVMGEGTPIVTLGSQLFKSTK 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1182 435 ProSitePatterns Protein kinases ATP-binding region signature. 140 163 IPR017441 GO:0005524
Lele16g1182 435 Gene3D Phosphorylase Kinase; domain 1 101 206 - -
Lele16g1182 435 ProSitePatterns Serine/Threonine protein kinases active-site signature. 253 265 IPR008271 GO:0004672|GO:0006468
Lele16g1182 435 ProSiteProfiles Protein kinase domain profile. 134 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele16g1182 435 FunFam Protein kinase superfamily protein 207 420 - -
Lele16g1182 435 Gene3D Transferase(Phosphotransferase) domain 1 207 421 - -
Lele16g1182 435 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 70 410 - -
Lele16g1182 435 FunFam Protein kinase superfamily protein 99 206 - -
Lele16g1182 435 Pfam Protein tyrosine and serine/threonine kinase 138 402 IPR001245 GO:0004672|GO:0006468
Lele16g1182 435 SUPERFAMILY Protein kinase-like (PK-like) 120 401 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1182 Lele-ChrLele16 6656252 6659273 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1182 74 408 Receptor kinase-like Gene Family AT1G30570 36.261 2.65e-61 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXa Lele16g1182 PK_Tyr_Ser-Thr 8.4e-42 CL0016