LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele16g1175	ATGGAACCCGAATCTGGAGCTTCGTCTTCTCGGAATCCTTCCCAGTTGTCATGGGTTAATCTCTCCAGGAGTCTAATATTAGCATATCAAAGCTTTGGCGTAGTATATGGAGATCTAAGTACATCACCTCTCTATGTTTTCACAAGCATATTTGGAGGAAAGTTGCAGAAGTACCACGATGAAGAAACTACCTTTGGTGCTTTTTCTTTAATTTTCTGGACCCTCACATTGATTCCCTTGCTTAAATACGTTTTCATCCTACTGAGTGCCGATGATAATTGTGAAGGAGGAACATTTGCTCTCTACTCACTGCTTTGCAGGCATGCCAAGTTTAATTTACTCCCCAACCAACAAGCAGCTGATGAGGAGCTATCTTCCTACAAATATGGTCCCTCATCACAGCCTGTATCCCCTTCCCCACTGAAGAGGTTTCTGGAGAAGCATAAGAGGTTAAGAACAGTTCTACTTATTGTAGTGTTGTTTGGTGCTTGCATGGTCATAGCTGATGGTGTGTTTACTCCAGCAATTTCAGTTCTATCAGCAGTATCAGGATTACAAGTTACTGAGAAAAAGCTTACTAATGGTGAACTTGTCTTGCCTGCCTGCGTCATATTGGTTGGCCTGTTTGCTCTCCAGCATTGTGGCACCCACAAAGTAGCATTTATGTTTGCACCAATTGTAATAATCTGGCTTGTAACTATTTTCTCTGTTGGACTGTATAATACAATATGCTGGAATCCAAAAATAGTTCGGGCTCTATCCCCACACTATATCATCAAGTTTTTTATCAAGACTGGCAAAGAAGGTTGGATTTCTCTTGGAGGGGTTCTTCTCTGTATCACTGGATCTGAAGCTATGTTTGCTGATCTTGGTCATTTCACCGCTTTTTCAATAAGACTTGCATTTGCTTTTGTTATATACCCTTGTTTGGTGGTACAGTACATGGGCCAAGCTGCTTTCTTATCTAGAAATCTCGGCTCTGTCCATAACAGTTTTTATGACGCAATCCCAAAACCTGTATATTGGCCTGTCTTTGTTATTGGCACCCTTGCTGCTATTGTGGGGAGTCAGGCTGTTATAACTGCCACTTTCTCCATTATCAAGCAGTGCCATGCTCTAGGTTGCTTTCCACGAGTGAAAGTTGTACACACCTCGAAACATATATATGGGCAGATCTATATCCCTGAAATAAACTGGATACTTATGGTCCTGACTCTTGCTATGACAGTTGGATTTCAGGACACGACCTTGATCGGAAATGCTTATGGACTTGCTTGTATAGCAGTTATGTTTGTGACTACATTTCTGATGGCACTTGTCATAATCTTCGTCTGGCAGAAAAGTGTCCTGCTTGCTACAATATTTCTTTTATTCTTCTGGGTGATAGAGGGCGCATATTTGTCAGCAGCATTCATAAAAGTTCCCCAGGGAGGATGGGTTCCTCTTGTCCTGTCATTCATCATCATGATTGTTATGTATGTATGGCATTATGGTACTCGGAGGAAATACAGCCATGATCTACACAACAAAGTTTCATTGAAATGGTTACTAGGATTGGGCCCTAGCCTGGGCATTGTCCGTGTACCGGGAATAGGTCTTGTCTACTCAGAACTGGCAACAGGAGTGCCTGCAATATTTTCCCACTTTGTTACAAATCTCCCTGCATTTCACAGTGTGTTGGTATTTGTTTGTGTAAAATCAGTTCCTGTTCCATACGTCTCACCCGAAGAACGTTTCCTCATAGGGCGTGTTTGTCCCAGGCCATATCGTATGTATAGATGTATCATCAGATATGGGTATAAGGACATCCAAAGAGATGACGGAGACTTTGAGAACCAACTCATACGAAGTATAGCAGAGTTTATCCAAATGGAAGCTACTCAGCCACAACTTTCAAGTTCTGAAAGTTCTTCACTTGACGGGAGGATGGCTGTTATAAGTGTTAGAGGCATAGGATCTACTTCAAGCTTGATAGTGTCCGAGCACGATGATGTTGGCCCGGACATGTCAATCCCTAGCAGCAAGTCTGTTACCCTGCGAAGCTTGCAATCGGTTTATGATGACGAGAACCCACAGGTCAGGAGGCGTCGAGTAAGATTTCAGCTACCTAACAATCCTAGCATGGATCCTGCTGTTAGGGATGAGCTTGTGGATTTGATTCAAGCTAAGGAGGCAGGAGTCGCATATATCATGGGGCACTCATACGTGAAGGCAAGGAAATCGTCCTCATTCTTGAAAAAGCTTGTGATTGATATTGGGTATTCATTTCTTCGGAAGAATTGCAGGGGTCCTTCTGTGGCCCTTAACATTCCTCACATCAGTCTTATTGAAGTTGGAATGATATATTACGTGTAG	2355	0.4263	MEPESGASSSRNPSQLSWVNLSRSLILAYQSFGVVYGDLSTSPLYVFTSIFGGKLQKYHDEETTFGAFSLIFWTLTLIPLLKYVFILLSADDNCEGGTFALYSLLCRHAKFNLLPNQQAADEELSSYKYGPSSQPVSPSPLKRFLEKHKRLRTVLLIVVLFGACMVIADGVFTPAISVLSAVSGLQVTEKKLTNGELVLPACVILVGLFALQHCGTHKVAFMFAPIVIIWLVTIFSVGLYNTICWNPKIVRALSPHYIIKFFIKTGKEGWISLGGVLLCITGSEAMFADLGHFTAFSIRLAFAFVIYPCLVVQYMGQAAFLSRNLGSVHNSFYDAIPKPVYWPVFVIGTLAAIVGSQAVITATFSIIKQCHALGCFPRVKVVHTSKHIYGQIYIPEINWILMVLTLAMTVGFQDTTLIGNAYGLACIAVMFVTTFLMALVIIFVWQKSVLLATIFLLFFWVIEGAYLSAAFIKVPQGGWVPLVLSFIIMIVMYVWHYGTRRKYSHDLHNKVSLKWLLGLGPSLGIVRVPGIGLVYSELATGVPAIFSHFVTNLPAFHSVLVFVCVKSVPVPYVSPEERFLIGRVCPRPYRMYRCIIRYGYKDIQRDDGDFENQLIRSIAEFIQMEATQPQLSSSESSSLDGRMAVISVRGIGSTSSLIVSEHDDVGPDMSIPSSKSVTLRSLQSVYDDENPQVRRRRVRFQLPNNPSMDPAVRDELVDLIQAKEAGVAYIMGHSYVKARKSSSFLKKLVIDIGYSFLRKNCRGPSVALNIPHISLIEVGMIYYV	784

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele16g1175	784	Pfam	K+ potassium transporter	29	602	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Lele16g1175	784	TIGRFAM	kup: potassium uptake protein	27	784	IPR003855	GO:0015079\|GO:0016020\|GO:0071805
	Lele16g1175	784	PANTHER	OSMOTIC STRESS POTASSIUM TRANSPORTER	23	783	IPR003855	GO:0015079\|GO:0016020\|GO:0071805

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele16g1175	Lele-ChrLele16	6598159	6603122	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele16g1175	1	784	Inorganic Solute Cotransporters	AT3G02050	78.454	0.0	1226