Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1156 ATGGCCAGCCCACAGTCCCATTTACCTCCTGGTTTCAGGTTTCACCCTACTGACGAGGAGCTCATTCTTCACTATCTCAGGAAGAAGGTCGCCTCTTTGCCCTTGCCCGTCTCCATCATTGCCGAGGTTGATATCTACAAGTTTGATCCCTGGGACTTACCCGAGAAGGCGGCGTTTGGGGATAAAGAATGGTACTTCTTCAGCCCTCGAGACCGCAAGTACCCGAACGGGGCGAGGCCCAACAGGGCGGCTGCTTCAGGGTACTGGAAGGCGACGGGCACTGATAAGGCCATAGTGGCGTCGTTGCCTGGAGGAAGAGCGACGGAGAGCATGGGGGTGAAGAAGGCTCTGGTTTTCTACACCGGAAAACCCCCCAAGGGCGTCAAGACCAACTGGATCATGCATGAATATCGCCTCCTCCACAACACCAGAAACAGACCCCTCAAGTTCCAAGACTCCTCCATGAGGTTAGATGACTGGGTTCTTTGCCGGATTTACAACAAGTCCAAATATGCAGCTGAATCTCTCACTGCTGAAGCAGAAACCTTGGTGGCCGACCAAGATCTCGCACATGAGCAGATGTTACAGAGCTCTCAATCTCCCCCTCCTCATCAAAATCTGATTTCTCAGAAATCGTTGTCTTTCTCGAACCTGTTAGATGCCAAGGACTTCTCCATGTTGAGCAGCTTATTATCTGACAACTATTCCACCCCACCTGGGTTTGAATCTGCTGCTGCTAATTCTAACTCTGAGATTATCCATCTGGATGAACAATCATCCCAAAATATTCATACCGACAACGCCTACTTGCTTCAGAGGACCCCCCAATTGAACCCCTTTGTCCAAAACATGGAAAACAACATGCACAAGCGTCAGATTTCAGGCCTAGACGAGGATGTTTCATACCCATCCAAGAGGTATCTGACCTCTTCCTGCAGTTTCCCTAATAACAATACGAACCAACTCGAGAACTTGCTCCTTAAGCGATCGTTGTTGAACCAGCAGTTACTTCTCGGGCCTCAGTATCTTCGCTTTCAGGGATAA 1044 0.4981 MASPQSHLPPGFRFHPTDEELILHYLRKKVASLPLPVSIIAEVDIYKFDPWDLPEKAAFGDKEWYFFSPRDRKYPNGARPNRAAASGYWKATGTDKAIVASLPGGRATESMGVKKALVFYTGKPPKGVKTNWIMHEYRLLHNTRNRPLKFQDSSMRLDDWVLCRIYNKSKYAAESLTAEAETLVADQDLAHEQMLQSSQSPPPHQNLISQKSLSFSNLLDAKDFSMLSSLLSDNYSTPPGFESAAANSNSEIIHLDEQSSQNIHTDNAYLLQRTPQLNPFVQNMENNMHKRQISGLDEDVSYPSKRYLTSSCSFPNNNTNQLENLLLKRSLLNQQLLLGPQYLRFQG 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1156 347 Gene3D NAC domain 17 173 IPR036093 GO:0003677|GO:0006355
Lele16g1156 347 PANTHER NAC TRANSCRIPTION FACTOR 56 8 222 - -
Lele16g1156 347 ProSiteProfiles NAC domain profile. 8 168 IPR003441 GO:0003677|GO:0006355
Lele16g1156 347 FunFam NAC transcription factor 56 17 173 - -
Lele16g1156 347 Pfam No apical meristem (NAM) protein 9 139 IPR003441 GO:0003677|GO:0006355
Lele16g1156 347 SUPERFAMILY NAC domain 4 168 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1156 Lele-ChrLele16 6473276 6474501 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1156 4 347 NAC Transcription Factor Family AT3G04070 49.296 5.72e-98 292
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele16g1156 NAM 2.2e-40 No_clan