Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1154 ATGGAAGAGCCGGTCGTGGTGAACAAGGGGGAAGATCAGCCTCTGGATTTGCCTCCGGGCTTCAGATTCCACCCCACCGATGAGGAAATCATTACTTATTATCTCACCGAGAAGGTCCTCAACAGCACTTTCAGTGCAACTGCCATCGGAGAGGCCGATTTGAACAAGTGCGAGCCTTGGGACTTGCCCAAGAAAGCCAAGATGGGAGAGAAAGAGTGGTACTTTTTCTACCAGAGGGATAGGAAGTATCCGACGGGCATGAGGACAAATCGGGCCACCGAGTCCGGTTACTGGAAGGCCACTGGAAAAGATAAAGAGATTTACAAAGGGAAAGGCAACCTGGTTGGAATGAAGAAGACCCTCGTCTTCTACCGAGGGAGAGCTCCTAAAGGAGAGAAGACCAACTGGGTTATGCATGAGTTTCGATTGGAAGGCAAATTCGCCACTTACAACCTCCCCAAAGCAGCCAAGGATGAATGGGTTGTAAGCAAGGTTTTCCACAAGAACTCTGATGTGAAAAAGAACCCAATTCAAGGCCTTTTGAGGATCAACTCCCTCGGCGACGATTTGCTCGACTGTTCGTCGCTCCCTCCTCTCATGGATCCTCCTTCCAAACCTACCTACAGCGACGGTGCCTTCAAGGGGACCATTCACCCATCCCCACCACCCATCTCATCATCTAAACCATCATCCGACGGCTATTATGTTCCCAACCTCTCCATCATCAGCAACAATCAGCCGCAGCAGCTGATGACGAAGCCTCAAGCCATGATGATGCCCAACAGTAATAAGAATTACACCCCCATGAATCAAGCGAATTCCAGTTTCATCAGTGACTCGCTTTTGCATCCTCAGACTCAAATCCAGAATCCCAGCTTCTCGTTTCAGCCGAATAATAATAATTCAGGTTATGGGATGAGTAATGATCAGCAGCAGCAGGCGTTTCTGAGAGCATTTGAGGCGAATAACAACAATGACGGCTTGTTTGGGTTGGAGAAATTCTGCAAGACGGAGCCGATGGTGTCGTCCGGCAATCAGTCTGTGGTGAGCATGTCGCAGGATACTGGCCTCAGCAACGACAGAAACGCCGACACGTCCTCCGCTGTTTCCAAGCTCAACATGGGAATAATAACGAACAAGGCATTGTACGAGGATCTTGAGGCTCCATCGGCTGGGCCCCTTTCTGAGCTGGAATGCCTGTGGGACTACTGA 1212 0.5008 MEEPVVVNKGEDQPLDLPPGFRFHPTDEEIITYYLTEKVLNSTFSATAIGEADLNKCEPWDLPKKAKMGEKEWYFFYQRDRKYPTGMRTNRATESGYWKATGKDKEIYKGKGNLVGMKKTLVFYRGRAPKGEKTNWVMHEFRLEGKFATYNLPKAAKDEWVVSKVFHKNSDVKKNPIQGLLRINSLGDDLLDCSSLPPLMDPPSKPTYSDGAFKGTIHPSPPPISSSKPSSDGYYVPNLSIISNNQPQQLMTKPQAMMMPNSNKNYTPMNQANSSFISDSLLHPQTQIQNPSFSFQPNNNNSGYGMSNDQQQQAFLRAFEANNNNDGLFGLEKFCKTEPMVSSGNQSVVSMSQDTGLSNDRNADTSSAVSKLNMGIITNKALYEDLEAPSAGPLSELECLWDY 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1154 403 SUPERFAMILY NAC domain 15 169 IPR036093 GO:0003677|GO:0006355
Lele16g1154 403 ProSiteProfiles NAC domain profile. 17 168 IPR003441 GO:0003677|GO:0006355
Lele16g1154 403 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 16 299 - -
Lele16g1154 403 Pfam No apical meristem (NAM) protein 18 143 IPR003441 GO:0003677|GO:0006355
Lele16g1154 403 FunFam NAC domain-containing protein 100-like 26 172 - -
Lele16g1154 403 Gene3D NAC domain 26 173 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1154 Lele-ChrLele16 6460497 6462028 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1154 1 202 NAC Transcription Factor Family AT5G18270 74.762 8.13e-113 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele16g1154 NAM 3.7e-39 No_clan