Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1137 ATGATTAACCAATATCTGAGATATTTTAAGTTCAGACAAAGTAACAAAAAGCTAATCCCATATCGCCACCCAATAATATTTAAGATTGTTGAAATTTTCAGAGCGACTCTAGTGGGCTATGATTTGAATGGGGAGAGGATGCCAGAGTTGAGAAGTGGAGCCAGGAGATCAAAGCGGCTTGGTGATCTTCAGCCTGCCCCACAACCTATTGAGGAGAACTGCGCACAAACTGCTCCAAACAAGACCAGAAGGAGAGTTGGTGGTGGGAGAGGAAGAGGTGGGAATGCCCCTGCTGTAGCAAAAGGAACTTCGCCAGCAGTGCCCACAAGACGAACTGCAGCTGGTAGGGGCCGGGGAGGTAGATTGGTTGATCTGGTTCCTGAACCTGTTGCGCTTGGGGCCCCTGAACCTGTTCTTAATCGTGAAGAGGTAGCAGCCAATAATAAGATTTTGATGGCGGGTGGAAGTGCAGACAAGGCGGCAGGAGCTGAAGAGGAGGCATGCACAACCCCTGTTCCTGAAACGGTACAAGTTGGTAGTTCTCCTTTATATAAGATAGAAACGAAGTTGGGTAAGGGTGGTTTCGGTCAAGTATATGTTGGCAGAAGGGTAAGTGGTGGCTCTGATCGGACAGGTCCTGATGCAATTGAGGTTGCGCTGAAGCTTGAACATAGAAATAGTAAAGGTTGCAATTATGGGCCTCCTTACGAGTGGCAAGTCTATAATACTCTGAACGGTTGTTATGGCATTCCTTGGGTTCATTACAAGGGTCGCCAAGGAGATTTCTATATACTGGTCATGGACATGCTTGGGCCCAGTCTTTGGGATGTATGGAATTCTCTTGGCCAGTCGATGTCACCAAATATGGTTGCGTGCATTGCAGTGGAGGCAATATCAATTCTTGAGAAGCTCCATATGAAAGGGTTTGTGCATGGAGATGTTAAACCAGAGAACTTTTTACTTGGCCAACCTGGAACAGCTGATGAGAAGAAGTTATATCTTATTGATCTTGGTTTGGCATCTAAATGGAAGGACACATCTGGTCAACATGTTGAATATGATCAAAGGCCTGACGTGTTTAGGGGAACCATAAGATATGCTAGCGTACATGCACATTTAGGTAGGACTGGAAGTAGGAGGGACGATCTTGAGTCCCTGGCGTATACATTAATATTTCTTATAAAAGGGAGGTTGCCTTGGCAGGGTTATCAGGGTGACAATAAAAGTTTTCTTGTTTCTAAGAAAAAGATGGGCACTTCTCCAGAGTTGATGTGCTGCTTTTGTCCTGCTCCATTCAAGCAGTTCCTTGAAGCTGTTACTAACATGAGATTTGATGAGGAGCCCAACTATTCCAAGCTTATATCATTATTTGACAGCTTGATTGAACCATCTTCTCAATTGAGACCAATCAGAATTGATGGAGCTTTAAAGGTTGGACAAAAGAGGGCTAGAATGCTTATAAATCTGGAAGATGATGAGCAGCCAAAAAAGAAAGTGCGATTGGGGAATCCTGCTACTCAGTGGATATCAGTGTATAATGCACGGCGTCCCATGAAACAGAGATATCACTATAATGTATCAGACGGTAGGCTTCAACAGCATGTAGACAAGGGGAATGAGGATGGATTATATATCAGCTGTGTGGCCTCCTCCACAAATCTTTGGGCCCTAACCATGGATGCAGGAACGGGTTTCTCCTCTCAGGTCTATGAGTTATCACCATTTTTCCTGCACAAGGATTGGATTATGGAACAATGGGAGAAAAATTACTATATTAGTTCTATAGCTGGTGCAACAAATGGGAGTTCCTTGGTTGTTATGTCCAAAGGAACTCCGTACACCCAGCAGTCCTACAAAGTAAGTGAATCATTTCCTTTCAAATGGATCAATAAGAAGTGGAAAGAAGGATTCCATGTTACCTCCATGACCACTGCTGGCAGTCGATGGGGCGTTGTTATGTCCAGGAATGCTGGGTATTCTGATCAGGTTGTGGAGCTGGACTTCTTATACCCAAGTGAAGGTATTCATCGGCGATGGGAGAGTGGTTACCGGATAACATCTATGGCTGCTACTGCTGATCAGGCAGCCTTCATTCTTAGCATACCGAAGTGCAAATTGCTCGATGAAACTCAAGAGACTCTACGTACCTCTGCCTTCCCTAGCACCCATGTGAAGGAGAAATGGACCAAGAATCTCTATATAGCTTCAATATGTTATGGGAGGACTGTTTGTTAG 2235 0.4461 MINQYLRYFKFRQSNKKLIPYRHPIIFKIVEIFRATLVGYDLNGERMPELRSGARRSKRLGDLQPAPQPIEENCAQTAPNKTRRRVGGGRGRGGNAPAVAKGTSPAVPTRRTAAGRGRGGRLVDLVPEPVALGAPEPVLNREEVAANNKILMAGGSADKAAGAEEEACTTPVPETVQVGSSPLYKIETKLGKGGFGQVYVGRRVSGGSDRTGPDAIEVALKLEHRNSKGCNYGPPYEWQVYNTLNGCYGIPWVHYKGRQGDFYILVMDMLGPSLWDVWNSLGQSMSPNMVACIAVEAISILEKLHMKGFVHGDVKPENFLLGQPGTADEKKLYLIDLGLASKWKDTSGQHVEYDQRPDVFRGTIRYASVHAHLGRTGSRRDDLESLAYTLIFLIKGRLPWQGYQGDNKSFLVSKKKMGTSPELMCCFCPAPFKQFLEAVTNMRFDEEPNYSKLISLFDSLIEPSSQLRPIRIDGALKVGQKRARMLINLEDDEQPKKKVRLGNPATQWISVYNARRPMKQRYHYNVSDGRLQQHVDKGNEDGLYISCVASSTNLWALTMDAGTGFSSQVYELSPFFLHKDWIMEQWEKNYYISSIAGATNGSSLVVMSKGTPYTQQSYKVSESFPFKWINKKWKEGFHVTSMTTAGSRWGVVMSRNAGYSDQVVELDFLYPSEGIHRRWESGYRITSMAATADQAAFILSIPKCKLLDETQETLRTSAFPSTHVKEKWTKNLYIASICYGRTVC 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1137 744 SMART serkin_6 184 486 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele16g1137 744 FunFam Casein kinase 1-like protein 156 503 - -
Lele16g1137 744 ProSiteProfiles Protein kinase domain profile. 184 461 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele16g1137 744 ProSitePatterns Serine/Threonine protein kinases active-site signature. 309 321 IPR008271 GO:0004672|GO:0006468
Lele16g1137 744 MobiDBLite consensus disorder prediction 52 121 - -
Lele16g1137 744 ProSitePatterns Protein kinases ATP-binding region signature. 190 221 IPR017441 GO:0005524
Lele16g1137 744 CDD STKc_CK1 184 457 - -
Lele16g1137 744 Gene3D Transferase(Phosphotransferase) domain 1 147 506 - -
Lele16g1137 744 SUPERFAMILY Protein kinase-like (PK-like) 184 470 IPR011009 -
Lele16g1137 744 Pfam Protein kinase domain 184 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele16g1137 744 PANTHER CASEIN KINASE-RELATED 185 703 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1137 Lele-ChrLele16 6375935 6381853 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1137 301 457 MAP Kinase Kinase Kinase AT5G50180 26.061 3.18e-08 54.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Lele16g1137 Pkinase 6.1e-16 CL0016