Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1125 ATGGCAGCCGAGAAGAGAGAATTAGAGATCAACAAGACTTCCAATGCTAACTCTAACAACACTAACCTCGAGCAAATCGTAGATTCTTCACCTTCTTTGGCTTCCGTTGGCAACGATACTTCTAATAATGAGGCTGAAGAACGACAGGCTCGTGACCTCAAAGCGGGTCTTCATCCCCTAAAGCACAAATTTGTATTTTGGTACACCCGCCGTACACCTGGAGTTCGAAATCAGACATCATACGAAGACAACATAAAGAGAATTGTTGATTTCAGTACGGTTGAAGGTTTTTGGGTTTGCTATTGCCATCTCGCTCGCCCTTCCTCCTTGCCAGTTCCTACAGATTTGCATCTTTTTAAGGAAGGCATTCGTCCTTTATGGGAGGACCCAGCTAATTGTAATGGTGGTAAGTGGATCATACGATTCAAAAAGGTCGTTTCAGGTCGCTTTTGGGAGGACTTGGTTCTTGCCTTAGTAGGTGACCAGCTTGATTATGGGGATAACATATGTGGCGCAGTACTAAGCATTCGTTTCAATGAGGATATATTGAGTGTCTGGAATCGCAATGCATCTGATCATCAGGCCGTGATGGCTCTGAGGGATTCAATTAAACGTCACTTGAAGCTTCCTCATAACTATGTCATGGAATACAAGCCCCATGATGCCTCTTTGCGAGACAATTCATCCTACAGAAACACCTGGTTGAGAGGATAG 714 0.4426 MAAEKRELEINKTSNANSNNTNLEQIVDSSPSLASVGNDTSNNEAEERQARDLKAGLHPLKHKFVFWYTRRTPGVRNQTSYEDNIKRIVDFSTVEGFWVCYCHLARPSSLPVPTDLHLFKEGIRPLWEDPANCNGGKWIIRFKKVVSGRFWEDLVLALVGDQLDYGDNICGAVLSIRFNEDILSVWNRNASDHQAVMALRDSIKRHLKLPHNYVMEYKPHDASLRDNSSYRNTWLRG 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1125 237 MobiDBLite consensus disorder prediction 12 43 - -
Lele16g1125 237 FunFam Eukaryotic translation initiation factor NCBP 30 230 - -
Lele16g1125 237 Gene3D RNA Cap, Translation Initiation Factor Eif4e 31 230 IPR023398 -
Lele16g1125 237 SUPERFAMILY eIF4e-like 50 233 IPR023398 -
Lele16g1125 237 ProSitePatterns Eukaryotic initiation factor 4E signature. 115 138 IPR019770 GO:0003723|GO:0003743|GO:0005737|GO:0006413
Lele16g1125 237 MobiDBLite consensus disorder prediction 1 48 - -
Lele16g1125 237 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4E RELATED 39 226 IPR001040 GO:0003723|GO:0003743|GO:0006413
Lele16g1125 237 Pfam Eukaryotic initiation factor 4E 59 217 IPR001040 GO:0003723|GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1125 Lele-ChrLele16 6336458 6339250 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1125 24 237 Eukaryotic Initiation Factors Gene Family AT5G18110 77.570 8.62e-125 351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g1345 13 23383545 23386201 Lele16g1125 16 6336458 6339250 hybridization
Lele14g1252 14 21709683 21712497 Lele16g1125 16 6336458 6339250 hybridization