Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1106 ATGGCTGACCCTCGGCGTCATCCCTCTTCCGCGGCTCGCCACCCTAAACCCTCATCCCCAGCCGCCGCCTCCACCCCTCCCTGTGGCGCCTGCAAGTTCCTCCGCAGGAAGTGCGTTGCTGGCTGCATTTTCTCTCCCCACTTTAGCTCCGATCAGGGCTCCGCCCGCTTCGCGGCCGTCCACAAGGTCTTCGGCGCTAGCAATGTCTCTAAGCTCTTGCTTCATATTCCCGTCAACCGCCGCCACGAGGCCGTGGTTACCATTTCCTACGAGGCTCAAGCTCGCTTGTCCGATCCTGTTTATGGCTGTGTTGCCACTGTTATTTCTTTGCAACAACAGGTGGCATCTCTGCAAGCGGAGCTAGGGATGGTTCAAAGTCAGCTGATGAACAGTAGGTATGCATTAGCAAGTGCTGTGCAGAGCTCGCATCAGCAGCAGCAGCCAAACATGACCATAGGACTCCAACCAGCGTACTCCAACAACAATTCATGTGCTTCGACCAATCTCATGAACATGAGCAGCAGCTTCAGCCCTTCTGGTTTTGACCTTGCGATGGAGCAGGCACCACCGTCTTCCCACAGCTTGGACCCTCTTCAATTCTCTCGCTTGTCCCAGGACGAGGAAGACGATGAACAAGAAAGCAGGATTCCCCATGTTTTCAACCATGACATTCTTCATCACCCTTGA 687 0.5502 MADPRRHPSSAARHPKPSSPAAASTPPCGACKFLRRKCVAGCIFSPHFSSDQGSARFAAVHKVFGASNVSKLLLHIPVNRRHEAVVTISYEAQARLSDPVYGCVATVISLQQQVASLQAELGMVQSQLMNSRYALASAVQSSHQQQQPNMTIGLQPAYSNNNSCASTNLMNMSSSFSPSGFDLAMEQAPPSSHSLDPLQFSRLSQDEEDDEQESRIPHVFNHDILHHP 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1106 228 MobiDBLite consensus disorder prediction 202 228 - -
Lele16g1106 228 ProSiteProfiles LOB domain profile. 26 128 IPR004883 -
Lele16g1106 228 MobiDBLite consensus disorder prediction 180 228 - -
Lele16g1106 228 PANTHER LOB DOMAIN CONTAINING PROTEIN 24 194 - -
Lele16g1106 228 MobiDBLite consensus disorder prediction 1 26 - -
Lele16g1106 228 Pfam Lateral organ boundaries (LOB) domain 27 125 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1106 Lele-ChrLele16 6241587 6242648 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1106 27 214 AS2 family AT3G03760 61.809 3.96e-71 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele16g1106 LOB 2.5e-36 No_clan