Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1088 ATGTTCTTCAACAGTATCAAGCGCAGACATCATAACACTTGCCACCAAAGCTTTAGAAAACTTCGCTTCAAAGGGATTCACAAAGCAAGAAATGGTGACCTTCTGGGTGCACACACGGTTGGAGTTGCTCACTGTGATGTGTTCAGAGATAGACTTGTAAACCCTCGGAATCCGACAATGGACAAAACCTTGTATGTAGAGCTGGTCAACAAGGGTATTGTTCCACAAGATCCGTTTGCATCCTTGGACCAAGGAAACCTGTTTGATAAACTTGATAACCAGTTCTCTATACAGATAATTCTCAAAAGAAACGTTCTGCGGCTTCACCAGAGAATTGCACTGGACAGTTCTACTGTGAGTTTCGTCTCTGATTTTGCATACAATCGTGATAAGTTCTACAAGAGCTTCGCGGATGCAATAGTAAAGATGGGGAGTGTTCAAGTTCTGGTCGAAAGTGCTGGAGAAGTTCGAAAGAATTGCAGGGCTTTCAATTAA 495 0.4263 MFFNSIKRRHHNTCHQSFRKLRFKGIHKARNGDLLGAHTVGVAHCDVFRDRLVNPRNPTMDKTLYVELVNKGIVPQDPFASLDQGNLFDKLDNQFSIQIILKRNVLRLHQRIALDSSTVSFVSDFAYNRDKFYKSFADAIVKMGSVQVLVESAGEVRKNCRAFN 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1088 164 Gene3D - 145 161 - -
Lele16g1088 164 SUPERFAMILY Heme-dependent peroxidases 34 164 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lele16g1088 164 Gene3D Peroxidase, domain 2 13 144 - -
Lele16g1088 164 ProSiteProfiles Plant heme peroxidase family profile. 34 164 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele16g1088 164 Pfam Peroxidase 34 126 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele16g1088 164 PANTHER - 34 164 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1088 Lele-ChrLele16 6142889 6143478 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1088 36 164 Peroxidase AT1G34510 46.512 2.05e-32 115