Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1087 ATGGAGGATCAGGGTTCCGAGAGAAGTGAGAGAGTGACAGTGAGGTCAAGGTGGACTCCGAAGCCGGAGCAAATCCTAATTCTGGAGTCCATCTTCAACAGTGGGACCGTCAATCCCTCCAAGGACGACACCGTCAGAATCAGAAAGCTTCTCGAGAAATTCGGCACTGTTGCCGACGCCAACGTCTTCTACTGGTTCCAGAACCGCCGCTCCAGATCGCGACGCCGACAGCGCCAGTTGCAGCAGCTAGCCTCAGAAGCCCTTCATCACCACCAGCTTCAGTCTAATCAGGTTGATGGCGGTGCAAGTGCAAGTCCGACTCCGTATGATCACCATCATCATCTGAGTAACACTGCCTCTGATTCTGCAGCTATGGCGGCTTATAATAATGGCAGCTGCTCCTCGTCTTATCTCGCTTCCCAGGAACCAATGGATCCTCATGCTTTCTTTTTCTCTGCTGATCATATGGGTTTCCCCGAAATTGATCACACTACTTGTGATTTGAACTTCCTTTCTGGGAGCATGACGGTGTTTATCAATGGGGTGGCAACAGAGATTCAGAGAGGACCCATAGACATGAAAACTATGTTTGGTGAAGATGTGATGTTAGTGCATTCGTCTGGAGTTCCACTTCCTACCAATGAGTTTGGCTTCTTAATGCAGGATTTGCAGCACGGGGAAAGCTACTTTCTGGTAATTAACCCCTTCATAGGAAGGAAAATGAAGCGAATTGAAGCAGCTACCAGTAGAAGGAAGGCTACCTGA 765 0.4915 MEDQGSERSERVTVRSRWTPKPEQILILESIFNSGTVNPSKDDTVRIRKLLEKFGTVADANVFYWFQNRRSRSRRRQRQLQQLASEALHHHQLQSNQVDGGASASPTPYDHHHHLSNTASDSAAMAAYNNGSCSSSYLASQEPMDPHAFFFSADHMGFPEIDHTTCDLNFLSGSMTVFINGVATEIQRGPIDMKTMFGEDVMLVHSSGVPLPTNEFGFLMQDLQHGESYFLVINPFIGRKMKRIEAATSRRKAT 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1087 254 SUPERFAMILY Homeodomain-like 14 82 IPR009057 -
Lele16g1087 254 Gene3D - 15 83 - -
Lele16g1087 254 PANTHER WUSCHEL-RELATED HOMEOBOX 11 6 234 IPR044558 GO:0003700|GO:0048830
Lele16g1087 254 CDD homeodomain 15 70 IPR001356 GO:0003677
Lele16g1087 254 SMART HOX_1 13 80 IPR001356 GO:0003677
Lele16g1087 254 ProSiteProfiles 'Homeobox' domain profile. 11 76 IPR001356 GO:0003677
Lele16g1087 254 FunFam WUSCHEL-related homeobox 11 15 82 - -
Lele16g1087 254 Pfam Homeodomain 15 75 IPR001356 GO:0003677
Lele16g1087 254 MobiDBLite consensus disorder prediction 90 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1087 Lele-ChrLele16 6136003 6137944 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1087 14 233 Wox Gene Family AT3G03660 50.000 1.56e-59 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Lele16g1087 Homeodomain 2.1e-13 CL0123