Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1086 ATGAGTTCACAAATATTCAACAACGGGGGTCATGGTTTCTGTGGGGACGTCAATCTTTTACCTCCAGTTCCTTCGTATATCTCCCCTCTTCTAGCTCGAACTCCCCAACTTTCACTGTCAAACACTTTTGGTCAGACTGTTGGCGAGATTGGGGCTCAGAACAAGAGCTTGCCTTTCAGACTTGGCGAGGAGGACATCGAAGCTAAGAGCTCTTCTGGGTTGAGAAATGGACACACAAAGCTCTGTGCCAGAGGCCACTGGAGGCCAGCTGAAGATGCCCGACTCAGAGAGCTCGTAGCTCAGTTCGGTCCTCAAAATTGGAACTTGATCGCCGACCATCTCCAAGGAAGATCAGGTAAAAGTTGCAGACTGAGGTGGTTCAATCAGCTTGATCCCAGAATTAACAGGAGGGCGTTCTCTGAGGAAGAAGAGGGGAGATTGTTGACTGCACATAGAATGTACGGGAACAAATGGGCCATGATTGCCAAACTGTTTCCTGGGAGGACAGATAATACAGTGAAGAACCACTGGCACGTGATAATGGCCAGGAAGCACAGAGAGCAATCGAGTGGTTGTAGGAGGAGGAGATCTTCTTCCGAAATCATCCGTCCACAGGCTTTAAATTTGACTCTCTCAAATAATGCAGTGAGCGAGTCCACCAACTCCAGCAACCTCATCGATGAATCTGCCTCATCCTCCACCGATCTCTCCCTCAGCCCCACATTTTTCTCAAACCCGAGTCCCCAAATGGGTCGGTCGAATGAGACGAAGCTGAGAACTGGGGACGTGGGATTCGACAGATTGTTTGTGGGTTGGAGGGAATGGATTGAGGGAGGGGCAGAAATGGGGAAGCTGGGGATGGGTACAGTGGACCAATCAAAATCAAATTCAGAGTCAAACTCAGAAATATCAGTATCTGAGTCAGTGGCCACCAACGGGACGAACCTCTCAATTTCTGGGGAAAGTGGGAACGTGAAGATGGAGTTCATCGATTTCCTTGGAGTAGGAGCTATATGA 1017 0.4916 MSSQIFNNGGHGFCGDVNLLPPVPSYISPLLARTPQLSLSNTFGQTVGEIGAQNKSLPFRLGEEDIEAKSSSGLRNGHTKLCARGHWRPAEDARLRELVAQFGPQNWNLIADHLQGRSGKSCRLRWFNQLDPRINRRAFSEEEEGRLLTAHRMYGNKWAMIAKLFPGRTDNTVKNHWHVIMARKHREQSSGCRRRRSSSEIIRPQALNLTLSNNAVSESTNSSNLIDESASSSTDLSLSPTFFSNPSPQMGRSNETKLRTGDVGFDRLFVGWREWIEGGAEMGKLGMGTVDQSKSNSESNSEISVSESVATNGTNLSISGESGNVKMEFIDFLGVGAI 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1086 338 Gene3D - 138 198 - -
Lele16g1086 338 MobiDBLite consensus disorder prediction 222 256 - -
Lele16g1086 338 SUPERFAMILY Homeodomain-like 84 177 IPR009057 -
Lele16g1086 338 SMART sant 135 183 IPR001005 -
Lele16g1086 338 SMART sant 83 132 IPR001005 -
Lele16g1086 338 PANTHER MYB PROTEIN-RELATED 84 235 - -
Lele16g1086 338 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 131 185 IPR017930 -
Lele16g1086 338 MobiDBLite consensus disorder prediction 222 257 - -
Lele16g1086 338 ProSiteProfiles Myb-like domain profile. 84 130 IPR001005 -
Lele16g1086 338 CDD SANT 138 178 IPR001005 -
Lele16g1086 338 Gene3D - 84 135 - -
Lele16g1086 338 CDD SANT 87 128 IPR001005 -
Lele16g1086 338 Pfam Myb-like DNA-binding domain 136 179 IPR001005 -
Lele16g1086 338 Pfam Myb-like DNA-binding domain 84 130 IPR001005 -
Lele16g1086 338 FunFam MYB transcription factor 84 135 - -
Lele16g1086 338 ProSiteProfiles Myb-like domain profile. 131 181 IPR001005 -
Lele16g1086 338 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 84 130 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1086 Lele-ChrLele16 6130338 6131646 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1086 83 274 MYB Transcription Factor Family AT1G69560 56.784 1.36e-69 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele16g1086 Myb_DNA-binding 7.6e-15 CL0123