Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1075 ATGGATCATTACAAGGTTCTAGGTCTGCACATGAACGCTACCAAAGAAGAAATCAAAGCGGCATTCAAGAAATTGGCCTTCCAGTTCCACCCAGACAAGCATTCGCTATCGGCCAAGGCCGTCAGGGACAATGCCACTCTCAGATTCAAGCAAGTCTCCGAGGCTTATGAGGTCCTCATGGATGATCGCAAGCGTGCGGACTACAATATACGTTCGCGGGCCGGTGCTAACAGAAGTGGTTTCTCTGCTGGTGGGACTAGCGGTTACAACTATTATTACTACTATAGTTATAACTATGATGGGAAAGGGAGCACTTACAGACCTAGATATAAATCTGGGTCTGGCTTTAGTGTTGACGGCACGGTATCCAAGTTTGAGTCTGCTCTTCGGTTTCTGACTACGCGAGCTTTTCTCCTCAATCTTGGCTTTGCTGGAGCTTTGTTGGGAGGGATTGTCATTATTGATTCAAGCAGAGAAGCCATATGGAAGATGCAAAATTCAGGGAAATCATTTGAAGAAGCCATGGAGACAATTCAGAAAGCGAAAGGCGAGAGACGATGA 561 0.4635 MDHYKVLGLHMNATKEEIKAAFKKLAFQFHPDKHSLSAKAVRDNATLRFKQVSEAYEVLMDDRKRADYNIRSRAGANRSGFSAGGTSGYNYYYYYSYNYDGKGSTYRPRYKSGSGFSVDGTVSKFESALRFLTTRAFLLNLGFAGALLGGIVIIDSSREAIWKMQNSGKSFEEAMETIQKAKGERR 186
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1075 186 PANTHER CO-CHAPERONE PROTEIN DJLA 4 111 - -
Lele16g1075 186 Pfam DnaJ domain 2 69 IPR001623 -
Lele16g1075 186 CDD DnaJ 2 61 IPR001623 -
Lele16g1075 186 SUPERFAMILY Chaperone J-domain 1 93 IPR036869 -
Lele16g1075 186 SMART dnaj_3 1 64 IPR001623 -
Lele16g1075 186 ProSitePatterns Nt-dnaJ domain signature. 49 68 IPR018253 -
Lele16g1075 186 ProSiteProfiles dnaJ domain profile. 2 72 IPR001623 -
Lele16g1075 186 Gene3D DnaJ domain 1 128 IPR036869 -
Lele16g1075 186 FunFam DnaJ domain protein 1 88 - -
Lele16g1075 186 PRINTS DnaJ domain signature 4 22 IPR001623 -
Lele16g1075 186 PRINTS DnaJ domain signature 64 83 IPR001623 -
Lele16g1075 186 PRINTS DnaJ domain signature 22 37 IPR001623 -
Lele16g1075 186 PRINTS DnaJ domain signature 44 64 IPR001623 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele16g1075 Lele-ChrLele16 6069543 6071391 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1075 3 69 C2H2 Transcription Factor Family AT1G74250 40.299 8.56e-11 58.2