Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1070 ATGTATCACGCAAAGAAGTTTCCCACGGGAACTGTCGTGCCAAATAAAGCTCAAGGTGGTGCTGAGCAGCTTGCAGGCATACCGGATTTGAGTGGATCTGCAGTAAAAAATGCCACACCTGTGGGAGGAAGTGGGAAACAACGATTACGGTGGACGTCAGATCTTCATGACCGTTTTGTGGATGCCATTACGCAACTCGGTGGACCAGATAGGGCAACTCCAAAAGGCGTTCTGCGGGTTATGGGTGTACCTGGACTCACTATTTATCATGTTAAAAGCCATTTACAGAAATACCGTCTTGCAAAGTACCTGCCGGAGTCGTCAGCTGACGGTAAAGTGTCTGAGAATTCTCTTCTTGAATTTCAGAGTCGAAGGATGAGAAAAGGAATTCTGGAGACACCGTATCTGGCACAGATTCTTCCCCGTGGGTATCTCTGTGTTCTTTTGTTAATTATATTTCCTAAAATGTATCTTTCCTTTCAACTCCGAGCACCTCTGCTAGTAACAATTTATAGAACCTTCATGGCCTTCAGGGGATTGCAAATCAGTGATGCTCTGAGGATGCAGATGGAGGTTCAGAAACGTCTCCATGAACAGCTAGAGGTCCAAAAGCAGTTACAAATGAGAATCGAAGCGCAGGGTAAATACTTGCAGAAGATCATAGAGGAGCAGCAGAAACTAGGTAATACCTTGAGAGCTTCGGAAACACTGCCATCATCAAAAGATGAGCAAGATCCTTTGTACTCAGAACCTTCAGGTGATGCCTCTGCAGAGACAGAGTCTCCGTTGAAGAAACAGAGAGTTGATGATGGCTCCAAGAATGGCATCACGACCCTCCCAGCTACCAATAAAGATTGCACAGAAGATTGA 870 0.4552 MYHAKKFPTGTVVPNKAQGGAEQLAGIPDLSGSAVKNATPVGGSGKQRLRWTSDLHDRFVDAITQLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRLAKYLPESSADGKVSENSLLEFQSRRMRKGILETPYLAQILPRGYLCVLLLIIFPKMYLSFQLRAPLLVTIYRTFMAFRGLQISDALRMQMEVQKRLHEQLEVQKQLQMRIEAQGKYLQKIIEEQQKLGNTLRASETLPSSKDEQDPLYSEPSGDASAETESPLKKQRVDDGSKNGITTLPATNKDCTED 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1070 289 Gene3D - 45 104 - -
Lele16g1070 289 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 45 262 IPR044848 GO:0003700
Lele16g1070 289 MobiDBLite consensus disorder prediction 272 289 - -
Lele16g1070 289 Pfam Myb-like DNA-binding domain 49 99 IPR001005 -
Lele16g1070 289 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 43 103 IPR017930 -
Lele16g1070 289 SUPERFAMILY Homeodomain-like 45 100 IPR009057 -
Lele16g1070 289 FunFam Myb family transcription factor 45 103 - -
Lele16g1070 289 Pfam MYB-CC type transfactor, LHEQLE motif 180 226 IPR025756 -
Lele16g1070 289 MobiDBLite consensus disorder prediction 232 246 - -
Lele16g1070 289 MobiDBLite consensus disorder prediction 232 289 - -
Lele16g1070 289 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 46 101 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1070 Lele-ChrLele16 6033850 6036845 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1070 42 245 G2-like Transcription Factor Family AT4G28610 43.137 4.21e-43 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lele16g1070 Myb_DNA-binding 2.8e-06 CL0123