Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1061 ATGGGGCGGATTATGCTGCTCGTATCTGACTTCGTTTTATCATTCATGAGGGTATGCTCGGGGGTTCTGATTAAGATGATCGTAAACAAATATCTGGGGTTGAGTCTTGAGCCACTCCGTGAGATCGTGAAGATTGCGATCATCATTACTAACATGTTCTTCTTTGCATTCCTCCGAATAATTACTCGCGGTGCCGCCTACAATCCACTCACTGTTTTGGCTAGTGCCATTTCTGGGGATTTCAGCAAATTCCTTTACTGCGTTGCTGCTCGAATTCCTGTTCAGGTGATTGGATCTATTATTGGGGTCAAGCTTATGATTGATACCTTTCCGGAAATAGGACGTGGACCACGTTTGAATATTGACATTCATCGAGGTGCTCTGATAGAAGGAATCCTAACATTCACAATTGTTAGCATATCACTTCGGCTCGCCACAAAAGTTCCTGAAGGTTTCTTCATGAAGACTTGGATCTCCAGTGTCTTCAAGCTAGCACTTCACATACTTGGTTCTGATCTAACTGGTGGTTGTATGAACCCGGCCTCTGTAATGGGGTGGGCTTATGCACGAGGGGATCATGTAACCAAGGAACACTTCGTTGTATACTGGCTTGCCCCTATGAAGGCCACTGTACTGGCAGTGTGGACCTTCAAATTGCTAGTTCGGCCTGTAAAAGAAGACAAATCAGGCACAAAAAATAAATTAGAATGA 711 0.443 MGRIMLLVSDFVLSFMRVCSGVLIKMIVNKYLGLSLEPLREIVKIAIIITNMFFFAFLRIITRGAAYNPLTVLASAISGDFSKFLYCVAARIPVQVIGSIIGVKLMIDTFPEIGRGPRLNIDIHRGALIEGILTFTIVSISLRLATKVPEGFFMKTWISSVFKLALHILGSDLTGGCMNPASVMGWAYARGDHVTKEHFVVYWLAPMKATVLAVWTFKLLVRPVKEDKSGTKNKLE 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1061 236 Pfam Major intrinsic protein 7 216 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele16g1061 236 PRINTS Major intrinsic protein family signature 160 182 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele16g1061 236 PRINTS Major intrinsic protein family signature 200 220 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele16g1061 236 PRINTS Major intrinsic protein family signature 129 147 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele16g1061 236 PRINTS Major intrinsic protein family signature 87 106 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lele16g1061 236 SUPERFAMILY Aquaporin-like 7 227 IPR023271 -
Lele16g1061 236 Gene3D Glycerol uptake facilitator protein. 4 234 IPR023271 -
Lele16g1061 236 PANTHER AQUAPORIN SIP2-1-RELATED 1 235 IPR044226 GO:0015267
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1061 Lele-ChrLele16 5985908 5987180 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1061 1 236 Major Intrinsic Protein MIP AT3G56950 59.494 8.12e-101 291