LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele16g1039	ATGGATTCTTTCCTTTTCGCCGATGATGACGATACCTTGTTTTCTGAGGCATTCCCCTCCGATTTTGACTTAGGGTTGGATGGCGATTTCGAGATTAATTTCGACGATCTTGACAATCTCCGTCTTCCCTTTAATGTCGACGAATTCCTTTTCGACGACGCATCTGTTATTCCTCCCTCGCAGTCGCAGATTGATGACGATCGTCAAGGAGTAGCTAATTGCGATTGCAATCCGACTTCCGACGTAGCTAGGTTTTCGAAATTGCAGTCTTATCCGCCTCCCTGTTTAGATAATTCAGGCGATCAGAATCCGCATGGTTCACACGAGTCTAAAGTTTCAAACTTCCAATCGCCGGAGTCTGATCCTTGCGACCGGGAATCTTCGGGTGGGCCAGTTTCATCTCAGGGTTCGGCTAACGTTGGGTCAGGTGGTTCTAATTTTACGGATTCACCTTCACCGACCCGATACGAGAGAGATTTTACATCTCAGGTTATTGTTGATGAGAACGTAAAGTTGGATGAAATCGGGAAGGGCTCCTATTTGAAGAGGAAGATGGAAAACAATGGAGGAAATGCTGAGCCGAGGACTACTAAGCACCAGAGGTCGTCGACGCCTATGGAGAATACTACTCGAGAGCCTGGTGTTAGTATTATCAATGAGGACGACGAGAAAAAGACGGCTAGGTTGATGAGGAATCGGGAAAGTGCCCAGCTTTCTAGGCAGAGAAAGAAGCAGTATGTGGAGGAGCTTGAGGAGAAGGTGAAATCAATGCATTCGACCATTGCCGATTTGAATAGTAAGATATCATTCGTCATGGGCGAGAATACCACTTTGAGACAGCGATTGATTGCTGGTGGAATGTGTCCACCGCCTCCAACTCCGGGGATGTATACCCATCCTCCGATGCCTACCATGCCTTATTCTTGGGGGCCGTATGGCCCCTATGTTGCTAACCCACTAGGGTCCCAGGTTCCTTTGGTACCAATTCCGAGATTAAAGTCTCAGCAACCGGCATCGGCCTCCAAGAGTAAAACGTCCGAGCGTAAGAAATCTGAAGGTAAAACTAAAAAGGTTGCCAGTGTCTGTTTTTTGGGTTTGTTATTCTTTGTCTTGCTTTTTGGTGGATTGGCTCCCCTTGTGAATGTTAAGTTTGATGGTTTAGTGGACGTTACTTATGGGAGGTCGCAGTATGTAAGCGATAGGTTCTATGGTCATCTCGGAGGGAAAGTCTGGCCCGTAAATGGTCCTATGACTAGGTCTGAAGGATACAAAGGAGCAGGATCTTCCAGTGGAAGATCTAGTATATTTGACAGGGCGACTGATGAGAAGTGGGACTCACACCATAAATTAGGTTCAGATGAATTTATTCATCTGGGCAATACTAGTCAGCCTCTTTTTGCTTCTTTGTATGTTCCTAGGAATGATAAGCTGGTGAAGATTGATGGGAATTTGATAATCAATTCTGTCTTGGCCAGTGAGAAAGCTATGGCATCTCAAGCTTCTCATATGGCAAAGAATGATAAAAGAGAAACTGGTTTGGCAATTTCGAAATATGGGGATTCTGCATTGGCTATTCCGGAAGTTGGAATAAATAGAGGCTCACATCCTTACTCGTATAGGAGTCCACCTGAACAGAGGAAGGCACTTCCGGATGGTTCAGCTGAAATTTTGAAGGACCATCTGATGTCAACTTCATCTGATGGTAAAATCCAACAGTGGTTCCGAGAAGGTCTCGCAGGGCCTATGTTAAGCTCCGGCATGTGCACAGAAGTTTTTCAATTTGACATCTCATCAACACAAGGAGCTATTGTGGCGGCATCATCATCAGCCAATGTTTCTGAAGAGAACCACCAGAATGCTAGTCGTCTCAGCAAGAGTAGGAACAGAAGAATTCTCCATAGGCTCCCACTTGCTGGATCCAGTAGCAACGCAAGTGAAGAACAAGGAGGACGAGATTCACTGAATGATAACTTCCTTGGTAACAAGTCCAGGTCCTCCATGGTGGTTTCTGTGCTCGTTGATCCCAAAGAGGCTGGAGATTTTGATGGAATGATGAAGCCGAAGTCACTTTCTAGAATATTTGTGGTCGTGCTTGTGGACAGCATCAAGTACGTAACATATTCGTGTGTTCTTCCTCGCTCTTCTCCGCATCGAGTGACTGCTTGA	2166	0.458	MDSFLFADDDDTLFSEAFPSDFDLGLDGDFEINFDDLDNLRLPFNVDEFLFDDASVIPPSQSQIDDDRQGVANCDCNPTSDVARFSKLQSYPPPCLDNSGDQNPHGSHESKVSNFQSPESDPCDRESSGGPVSSQGSANVGSGGSNFTDSPSPTRYERDFTSQVIVDENVKLDEIGKGSYLKRKMENNGGNAEPRTTKHQRSSTPMENTTREPGVSIINEDDEKKTARLMRNRESAQLSRQRKKQYVEELEEKVKSMHSTIADLNSKISFVMGENTTLRQRLIAGGMCPPPPTPGMYTHPPMPTMPYSWGPYGPYVANPLGSQVPLVPIPRLKSQQPASASKSKTSERKKSEGKTKKVASVCFLGLLFFVLLFGGLAPLVNVKFDGLVDVTYGRSQYVSDRFYGHLGGKVWPVNGPMTRSEGYKGAGSSSGRSSIFDRATDEKWDSHHKLGSDEFIHLGNTSQPLFASLYVPRNDKLVKIDGNLIINSVLASEKAMASQASHMAKNDKRETGLAISKYGDSALAIPEVGINRGSHPYSYRSPPEQRKALPDGSAEILKDHLMSTSSDGKIQQWFREGLAGPMLSSGMCTEVFQFDISSTQGAIVAASSSANVSEENHQNASRLSKSRNRRILHRLPLAGSSSNASEEQGGRDSLNDNFLGNKSRSSMVVSVLVDPKEAGDFDGMMKPKSLSRIFVVVLVDSIKYVTYSCVLPRSSPHRVTA	721

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele16g1039	721	MobiDBLite	consensus disorder prediction	181	212	-	-
	Lele16g1039	721	Pfam	bZIP transcription factor	223	280	IPR004827	GO:0003700\|GO:0006355
	Lele16g1039	721	MobiDBLite	consensus disorder prediction	190	212	-	-
	Lele16g1039	721	MobiDBLite	consensus disorder prediction	635	659	-	-
	Lele16g1039	721	PANTHER	BASIC-LEUCINE ZIPPER TRANSCRIPTION FACTOR F-RELATED	25	717	-	-
	Lele16g1039	721	Coils	Coil	233	267	-	-
	Lele16g1039	721	MobiDBLite	consensus disorder prediction	638	659	-	-
	Lele16g1039	721	SMART	brlzneu	220	284	IPR004827	GO:0003700\|GO:0006355
	Lele16g1039	721	MobiDBLite	consensus disorder prediction	89	156	-	-
	Lele16g1039	721	FunFam	bZIP transcription factor 49	223	285	-	-
	Lele16g1039	721	Gene3D	-	222	284	-	-
	Lele16g1039	721	ProSiteProfiles	Basic-leucine zipper (bZIP) domain profile.	222	282	IPR004827	GO:0003700\|GO:0006355
	Lele16g1039	721	MobiDBLite	consensus disorder prediction	333	352	-	-
	Lele16g1039	721	SUPERFAMILY	Leucine zipper domain	224	282	IPR046347	GO:0003700\|GO:0006355
	Lele16g1039	721	CDD	bZIP_HY5-like	225	275	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele16g1039	Lele-ChrLele16	5854086	5857232	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele16g1039	23	720	bZIP Transcription Factor Family	AT2G40950	46.165	2.64e-149	450

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	bZIP	Lele16g1039		bZIP_1	5.7e-12	CL0018