Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1036 ATGGCCACAAGAACCTTTGTTCCACGACAAGCAGTGAGAGGGGAGGCAGTGGTTGGAGGAGTAAAGCAGCAGAAGAAGAATGGAGCTGTGGAAGTAAGAAATCGCAGAGCCCTCGGCGACATAGGAAATCATCAGGTGCCTGCTAGAGGCATAGAAGTCGTAAAGCCCAACCGTCCCGTCACCAGGAGCTTCCGAGCCCAACTGCTTGCCAATGCCCAAGCTGCTGCTGAAAACAACAAGAAACAGGCTTGTGCCAATGTCGGTGGGCCTCCTCCTCCTGTTCTCGATGTGATTGCTAATAGAGCCGCGCCTAAGCCTGCTCAGAAAATAGTCTCTGTTAAACCCAGGAATGAAGATGTTGCTGAAATAAAAATGGAATTAGTCAAAGAAGAAGAAGTTAGAAAGGAGAAGATTGTGAGCAAGAAAAAAGAAGGAGATGAAAAATCAAAGAAGAAACCACACACTCTCACTTCAGTACTCACAGCTAGAAGCAAGTTAGCATGTGGTGTGACCAACAAACCAAAGGAGCAGATTGTGGATATTGATGCAGCTGACACTGAGAATGAACTTGCAGCCGTGGAGTATATTGAAGACATTTACAAGTTCTATAAGCTAGTTGAGAATGAGAACCGTCCGCACGACTACATTGGCTCGCAGCTTGAGATCAATGAAAAGATGAGAGCAATATTGGTTGATTGGCTCATAGATGTGCACTCCAAGTTTGATCTTTCGCCTGAAACTCTTTATCTTACTATCAACATAATAGATCGATTCCTCTCAACCAAGATCGTGCCAAGAAGGGAACTTCAACTGGTTGGCATCAGCGCCATGCTCATGGCTTCCAAGTATGAAGAAATCTGGCCCCCTCAGGTCAACGACTTTGTTTTCCTGTCGGATAGAGCTTATTCTCATGAACAGATACTTGCAATGGAGAAAACCATTCTGGGCAAGCTGGAATGGACTTTGACAGTACCTACGCACTATGTGTTCCTGGTTCGTTTCATCAAGGCATCGCTCCTAGATGAGGAGTTAGAAAACACGGTGCATTTTCTTGCTGAGTTGGGACTGATGAATTACGAGACCATGATATTGCACAGCCCATCAAAGGTGGCGGCGTCAGCAGTGTATGCGGCTCGGTGCACTCTGAATAAGAGCCCCTCCTGGAACGAGACGCTGAGTCTACATACGGGCTACTCAGAAGAACAACTCATGGATTGTGCGGGAGAATTGGTGAGGTGCCACTCCGTGGCTGGGAGTGGGAAGCTGCGGGCAGTGTACAGAAAGTACTCAGATGTGAAGAGAGGGGCGGTGGCGCTGCTTCCTCCGGCTAAGAATCTCTTACAATTAGGGGAATGA 1356 0.4742 MATRTFVPRQAVRGEAVVGGVKQQKKNGAVEVRNRRALGDIGNHQVPARGIEVVKPNRPVTRSFRAQLLANAQAAAENNKKQACANVGGPPPPVLDVIANRAAPKPAQKIVSVKPRNEDVAEIKMELVKEEEVRKEKIVSKKKEGDEKSKKKPHTLTSVLTARSKLACGVTNKPKEQIVDIDAADTENELAAVEYIEDIYKFYKLVENENRPHDYIGSQLEINEKMRAILVDWLIDVHSKFDLSPETLYLTINIIDRFLSTKIVPRRELQLVGISAMLMASKYEEIWPPQVNDFVFLSDRAYSHEQILAMEKTILGKLEWTLTVPTHYVFLVRFIKASLLDEELENTVHFLAELGLMNYETMILHSPSKVAASAVYAARCTLNKSPSWNETLSLHTGYSEEQLMDCAGELVRCHSVAGSGKLRAVYRKYSDVKRGAVALLPPAKNLLQLGE 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1036 451 ProSitePatterns Cyclins signature. 227 258 IPR006671 -
Lele16g1036 451 Gene3D - 212 323 - -
Lele16g1036 451 SMART cyclin_7 232 316 IPR013763 -
Lele16g1036 451 SMART cyclin_7 329 412 IPR013763 -
Lele16g1036 451 SUPERFAMILY Cyclin-like 187 322 IPR036915 -
Lele16g1036 451 Pfam Cyclin, N-terminal domain 198 322 IPR006671 -
Lele16g1036 451 Pfam Cyclin, C-terminal domain 325 442 IPR004367 -
Lele16g1036 451 PANTHER CYCLINS 149 431 IPR039361 -
Lele16g1036 451 PIRSF Cyclin_A_B_D_E 1 450 IPR039361 -
Lele16g1036 451 SUPERFAMILY Cyclin-like 324 444 IPR036915 -
Lele16g1036 451 SMART Cyclin_C_2 325 443 IPR004367 -
Lele16g1036 451 CDD CYCLIN 323 411 IPR013763 -
Lele16g1036 451 CDD CYCLIN 226 315 IPR013763 -
Lele16g1036 451 FunFam G2/mitotic-specific cyclin-1 313 438 - -
Lele16g1036 451 Gene3D - 198 438 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1036 Lele-ChrLele16 5843106 5845380 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele16g1036 1 447 Core Cell Cycle Gene Families AT4G37490 54.066 1.30e-147 426